Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 COPS8P2-201ENST00000473228 627 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC28A1O00337 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC28A1O00337 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.66□□□□□ -1.66
SLC28A1O00337 RPL7L1P4-201ENST00000513004 707 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC28A1O00337 HMGB1P19-201ENST00000517578 577 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC28A1O00337 AC022832.1-201ENST00000530718 645 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC28A1O00337 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.66□□□□□ -1.66
SLC28A1O00337 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC28A1O00337 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC28A1O00337 NOP56P3-201ENST00000549457 385 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 OR11J2P-201ENST00000555298 907 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 AC012146.2-201ENST00000576545 416 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 SS18L2P2-201ENST00000583960 235 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SLC28A1O00337 AL121932.1-201ENST00000605542 214 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 AL021368.1-201ENST00000607490 540 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 AC015804.1-201ENST00000622935 435 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC28A1O00337 AC000123.3-201ENST00000624029 4975 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC28A1O00337 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC28A1O00337 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC28A1O00337 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC28A1O00337 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC28A1O00337 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC28A1O00337 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SLC28A1O00337 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SLC28A1O00337 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SLC28A1O00337 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SLC28A1O00337 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SLC28A1O00337 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SLC28A1O00337 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
SLC28A1O00337 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SLC28A1O00337 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.65□□□□□ -1.66
SLC28A1O00337 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.65□□□□□ -1.66
SLC28A1O00337 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.65□□□□□ -1.66
SLC28A1O00337 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SLC28A1O00337 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC28A1O00337 AL391361.1-201ENST00000405580 489 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC28A1O00337 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC28A1O00337 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC28A1O00337 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC28A1O00337 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC28A1O00337 RPS27P18-201ENST00000431701 247 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.65□□□□□ -1.67
SLC28A1O00337 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC28A1O00337 AC099063.2-201ENST00000446360 662 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.65□□□□□ -1.67
SLC28A1O00337 RN7SL101P-201ENST00000496350 279 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.65□□□□□ -1.67
SLC28A1O00337 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SLC28A1O00337 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC28A1O00337 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC28A1O00337 AL049839.1-201ENST00000556151 657 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 MIR4691-201ENST00000583764 85 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 IMMP1LP1-201ENST00000605170 488 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 AL355802.4-201ENST00000607635 548 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 SNORD91B-202ENST00000608459 222 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 AL096803.3-201ENST00000609032 532 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 AL391834.1-201ENST00000609609 560 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 AL022401.1-201ENST00000619498 108 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 AP003497.2-201ENST00000624220 967 ntBASIC4.65□□□□□ -1.67
SLC28A1O00337 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC28A1O00337 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
SLC28A1O00337 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC28A1O00337 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SLC28A1O00337 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SLC28A1O00337 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
SLC28A1O00337 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC28A1O00337 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.64□□□□□ -1.67
SLC28A1O00337 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SLC28A1O00337 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SLC28A1O00337 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SLC28A1O00337 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC28A1O00337 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.64□□□□□ -1.67
SLC28A1O00337 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SLC28A1O00337 GJA6P-201ENST00000415117 1042 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 AC009302.1-201ENST00000417147 390 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 DPY19L1P2-201ENST00000426647 915 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 RPS17P8-201ENST00000434525 335 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.64□□□□□ -1.67
SLC28A1O00337 RHOT1P3-201ENST00000436571 331 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC28A1O00337 AL691517.1-201ENST00000440833 1235 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 CNOT7P2-201ENST00000441051 832 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 XKRY2-201ENST00000442362 1093 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 MTND2P25-201ENST00000449028 610 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 AURKAPS1-201ENST00000451805 1212 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.64□□□□□ -1.67
SLC28A1O00337 RNU7-27P-201ENST00000459281 62 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SLC28A1O00337 AC090114.3-201ENST00000479267 829 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 RN7SL809P-201ENST00000482040 297 ntBASIC4.64□□□□□ -1.67
SLC28A1O00337 HIGD1AP14-201ENST00000507617 282 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms