Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 ATP5F1P7-201ENST00000567330 760 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 MIR4472-2-201ENST00000582069 67 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 AC090312.2-201ENST00000582687 378 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 AP005432.2-201ENST00000608162 586 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 AC005156.1-201ENST00000613371 573 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 VN1R9P-201ENST00000614184 867 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 AC073569.3-201ENST00000619055 682 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 AC138907.10-201ENST00000623708 983 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SRRM4A7MD48 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SRRM4A7MD48 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 AL022322.2-201ENST00000624072 20397 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SRRM4A7MD48 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SRRM4A7MD48 AC017007.4-201ENST00000503353 1352 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 AL731532.2-201ENST00000623542 1953 ntBASIC4.13□□□□□ -1.75
SRRM4A7MD48 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SRRM4A7MD48 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SRRM4A7MD48 VN2R3P-201ENST00000422626 1412 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SRRM4A7MD48 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC100778.3-201ENST00000580060 1750 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC046144.1-201ENST00000478559 1853 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 RNU6-468P-201ENST00000384003 109 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 RNU6-98P-201ENST00000384173 107 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 MIR600-201ENST00000385007 98 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 MIR92A2-201ENST00000385299 75 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 SNORA11.5-201ENST00000408163 128 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 UBE2V1P9-201ENST00000414760 368 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AL139148.1-201ENST00000427122 680 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 COX6CP13-201ENST00000428703 226 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AL121776.1-201ENST00000429337 372 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 CFL1P1-202ENST00000432948 411 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC006994.1-201ENST00000438212 839 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 MTND6P6-201ENST00000478031 263 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC104109.1-201ENST00000498563 436 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 HPRT1P2-201ENST00000505250 544 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 GTF2F2P1-201ENST00000511083 675 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AP003355.1-201ENST00000518956 587 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 SMARCE1P4-201ENST00000523647 241 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC087894.1-201ENST00000538359 518 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC068993.1-201ENST00000546724 589 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC126365.2-201ENST00000580630 379 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 RPSAP73-201ENST00000614820 330 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC123768.4-201ENST00000616244 701 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC078880.5-201ENST00000617845 421 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC090527.3-201ENST00000619041 548 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 BX005214.3-202ENST00000619809 325 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC010872.1-201ENST00000624225 675 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 CDRT1-208ENST00000630868 794 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC073869.10-201ENST00000642016 354 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC011493.1-201ENST00000596753 1632 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SRRM4A7MD48 CASC19-221ENST00000641309 1382 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC000374.1-201ENST00000434698 1745 ntBASIC4.12□□□□□ -1.75
SRRM4A7MD48 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SRRM4A7MD48 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.12□□□□□ -1.75
SRRM4A7MD48 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SRRM4A7MD48 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SRRM4A7MD48 AC090971.4-201ENST00000560291 1800 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms