Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.76□□□□□ -1.49
SHISA3A0PJX4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.76□□□□□ -1.49
SHISA3A0PJX4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHISA3A0PJX4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHISA3A0PJX4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SHISA3A0PJX4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC100810.3-201ENST00000633189 2240 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 RNU6-809P-201ENST00000384461 107 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 RPL31P1-201ENST00000398116 372 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 RNA5SP177-201ENST00000410122 107 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 EEF1A1P40-201ENST00000412883 573 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC023141.1-201ENST00000419418 379 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC093107.1-201ENST00000422772 609 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC073069.1-201ENST00000428657 441 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC007365.2-201ENST00000428806 458 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 SNRPEP7-201ENST00000438350 220 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 SNX18P9-201ENST00000440580 835 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 RAD23BP3-201ENST00000454157 1152 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 MTCO3P20-201ENST00000454926 688 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 RPL7P6-201ENST00000480903 738 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 RPL35P6-201ENST00000490024 372 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC112204.1-201ENST00000502591 103 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC025674.1-201ENST00000507074 324 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC016559.1-201ENST00000511420 199 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 OR52H2P-201ENST00000514607 902 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 SCARNA6.1-201ENST00000516989 238 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC008562.1-201ENST00000521763 330 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AP005639.2-201ENST00000527592 928 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AP003034.1-201ENST00000534621 422 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 NMNAT1P1-201ENST00000554095 876 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AL359212.1-201ENST00000556608 614 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC061975.3-201ENST00000583209 244 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC092032.1-201ENST00000603090 165 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC005070.2-201ENST00000604391 260 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC097468.3-201ENST00000607956 456 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AL352984.2-201ENST00000611153 546 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC024255.1-201ENST00000614376 102 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC004241.2-201ENST00000614562 444 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 FRG1KP-201ENST00000623592 341 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC110994.2-201ENST00000635481 492 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 MIR3662-201ENST00000637030 95 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 AC090017.1-201ENST00000548612 1779 ntBASIC5.75□□□□□ -1.49
SHISA3A0PJX4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
SHISA3A0PJX4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 AC093225.1-201ENST00000506867 1408 ntBASIC5.74□□□□□ -1.49
SHISA3A0PJX4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SHISA3A0PJX4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms