Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC011468.4-201ENST00000603942 409 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AP001521.2-201ENST00000608772 546 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AC233309.1-201ENST00000619522 751 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AL356585.4-201ENST00000623078 1229 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 AL161912.4-201ENST00000623889 2468 ntBASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7□□□□□ -1.29
PCDHB11Q9Y5F2 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AL512646.1-201ENST00000269395 1077 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 Y_RNA.46-201ENST00000362695 102 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 Y_RNA.184-201ENST00000363884 108 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 MIR559-201ENST00000385188 96 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 RNU2-18P-201ENST00000411224 162 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC233981.1-201ENST00000423224 461 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC134879.1-201ENST00000426062 394 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC073069.1-201ENST00000428657 441 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 RPS3AP54-201ENST00000435535 734 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC092601.1-201ENST00000444526 383 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 PSPC1P2-201ENST00000455130 225 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 YRDCP3-201ENST00000456507 480 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 SNORD19B-201ENST00000459623 84 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 RPS16P9-201ENST00000477220 427 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 Y_RNA.691-201ENST00000516611 103 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 SNORD60.2-201ENST00000516883 86 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC022616.6-201ENST00000520479 119 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AF279873.1-201ENST00000523393 313 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC107952.1-201ENST00000524200 376 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 ELOCP31-201ENST00000540463 467 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 PDCD5P1-201ENST00000543528 309 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC068714.1-201ENST00000559623 800 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC099489.2-201ENST00000574976 260 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 RN7SL667P-201ENST00000582817 298 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AL355333.1-201ENST00000605632 279 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-84P-201ENST00000607737 102 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AP005329.3-201ENST00000609924 686 ntBASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDHB11Q9Y5F2 MTND5P16-201ENST00000460269 1703 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 KARSP2-201ENST00000415696 1639 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 AC079178.2-201ENST00000439323 1624 ntBASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHB11Q9Y5F2 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms