Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC002487.1-201ENST00000604565 994 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 AC114947.2-201ENST00000565748 2125 ntBASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX2IPQ9Y2D8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AC003985.2-201ENST00000562268 1669 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 MFSD8-220ENST00000641243 1422 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 RPL26P37-201ENST00000411983 438 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AL445183.3-201ENST00000414168 502 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 MTCO2P21-201ENST00000419780 677 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 RPSAP51-201ENST00000497462 645 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 HAUS1P3-201ENST00000523909 662 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 MTATP6P15-201ENST00000527233 835 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 EIF4A2P5-201ENST00000529914 499 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AC024940.3-201ENST00000538551 316 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AP005403.1-201ENST00000579720 229 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 MTCO2P22-201ENST00000603246 681 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AC073387.2-201ENST00000604797 784 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 VN1R9P-201ENST00000614184 867 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AC004232.3-201ENST00000622977 525 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 AC079298.1-201ENST00000625026 1619 ntBASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SSX2IPQ9Y2D8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 HSPA8P15-201ENST00000401676 786 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 GPS2P1-201ENST00000411761 986 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 LIPT1P1-201ENST00000415870 1186 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC093422.3-201ENST00000428506 305 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 VN1R25P-201ENST00000443385 738 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 Z73417.1-201ENST00000447373 778 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 RPS23P9-201ENST00000448848 438 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 MTCYBP35-201ENST00000503630 1137 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 OR10V3P-201ENST00000525712 725 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC122688.1-201ENST00000541494 223 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC092490.3-201ENST00000545370 572 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 PCNPP1-201ENST00000552501 511 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AP005262.1-201ENST00000582646 997 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC245036.5-201ENST00000596330 847 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC114878.2-201ENST00000604863 1251 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 CYP4F35P-202ENST00000636121 390 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 LINC01739-205ENST00000641890 573 ntBASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SSX2IPQ9Y2D8 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms