Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN11AQ9UI33 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
SCN11AQ9UI33 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
SCN11AQ9UI33 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 RNU6-761P-201ENST00000384148 107 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 RPL36AP36-201ENST00000418616 301 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 AC062016.2-201ENST00000420950 676 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 RPL34P6-201ENST00000432390 345 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 NMNAT1P2-201ENST00000435192 860 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 AC108145.1-201ENST00000503770 153 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 RNA5SP73-201ENST00000516744 108 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 AC109635.6-201ENST00000525487 1113 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 IMMP1LP1-201ENST00000605170 488 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 AC034229.5-201ENST00000624258 185 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN11AQ9UI33 AP000473.2-201ENST00000602659 1537 ntBASIC5.71□□□□□ -1.5
SCN11AQ9UI33 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 VTI1BP4-201ENST00000427516 527 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AL356276.2-201ENST00000435919 558 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 RNA5SP249-201ENST00000516127 99 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC099654.3-201ENST00000447087 1546 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 MFSD13B-201ENST00000420133 1290 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AL691449.1-201ENST00000426570 421 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 RPS26P4-201ENST00000431743 355 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC069304.1-201ENST00000491593 704 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 RNA5SP303-201ENST00000516192 130 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 PSMB7P1-201ENST00000556349 514 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 RN7SL600P-201ENST00000581811 299 ntBASIC5.7□□□□□ -1.5
SCN11AQ9UI33 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN11AQ9UI33 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AC104260.2-201ENST00000623551 3497 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 SPRR2C-201ENST00000290702 219 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 RNU1-132P-201ENST00000364300 164 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 PPIAP31-201ENST00000405422 495 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 FCF1P5-201ENST00000406490 482 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 CASKP1-201ENST00000412870 582 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 DDX39BP2-208ENST00000453923 258 ntBASIC5.69□□□□□ -1.5
SCN11AQ9UI33 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN11AQ9UI33 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms