Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AC068790.4-201ENST00000602474 263 ntBASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
CLCF1Q9UBD9 AL132640.2-201ENST00000559968 1698 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 OR10AB1P-202ENST00000641219 1686 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 DHX40P1-201ENST00000588725 1412 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 GLULP6-201ENST00000399502 913 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 RN7SKP97-201ENST00000410966 333 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 OR51B3P-201ENST00000412287 913 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AL591848.1-201ENST00000413092 322 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 RAB28P3-201ENST00000448325 597 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC079168.2-201ENST00000453977 416 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 RNU6-775P-201ENST00000459318 96 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC022336.1-201ENST00000475510 337 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 MTND3P6-201ENST00000485242 339 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC111000.3-201ENST00000508057 576 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC092593.2-201ENST00000513866 913 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 MTATP6P25-201ENST00000574491 261 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC073091.2-201ENST00000603205 907 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC019193.2-201ENST00000610012 634 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC239803.2-201ENST00000610161 430 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 MIR7641-1-201ENST00000627518 61 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 AC073869.10-201ENST00000642016 354 ntBASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CLCF1Q9UBD9 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLCF1Q9UBD9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLCF1Q9UBD9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CLCF1Q9UBD9 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.21□□□□□ -1.73
CLCF1Q9UBD9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC017079.1-201ENST00000333650 415 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 RNU1-32P-201ENST00000363937 159 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 RNA5SP397-201ENST00000391323 118 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AL590762.2-201ENST00000395798 571 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 RN7SKP267-201ENST00000410381 285 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC140479.3-201ENST00000418944 1126 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC106901.1-201ENST00000425086 698 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 RAD1P2-201ENST00000446414 663 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC009220.1-201ENST00000451614 275 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 RPL31P53-201ENST00000457065 348 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC105918.1-201ENST00000474399 838 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 AC093720.1-201ENST00000505681 714 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 OR51K1P-201ENST00000510214 950 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 RNU6-319P-201ENST00000516025 108 ntBASIC4.21□□□□□ -1.74
CLCF1Q9UBD9 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms