Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC010201.1-201ENST00000605051 540 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 AC012409.3-201ENST00000611343 981 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 AC006065.6-201ENST00000625201 545 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AL137100.1-201ENST00000556703 1620 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 RNU1-130P-201ENST00000363930 160 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 FTH1P16-201ENST00000435241 552 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AC096741.1-201ENST00000472250 846 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 RNA5SP497-201ENST00000516081 97 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 MIR4715-201ENST00000584117 79 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 AP001160.4-201ENST00000596971 382 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AC104785.1-201ENST00000603220 588 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 MIR6820-201ENST00000611508 62 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AC002044.3-201ENST00000623314 541 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.76□□□□□ -1.65
CISHQ9NSE2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CISHQ9NSE2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CISHQ9NSE2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CISHQ9NSE2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CISHQ9NSE2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CISHQ9NSE2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 RPL23AP59-201ENST00000399415 461 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 RPS4XP9-201ENST00000405151 780 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 RN7SKP167-201ENST00000411047 285 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC245028.1-201ENST00000423259 256 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC012519.1-201ENST00000424588 610 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 DDX39BP2-208ENST00000453923 258 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 MTND2P28-201ENST00000457540 1044 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC053481.1-201ENST00000467217 306 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 RPL7AP10-201ENST00000481016 791 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 MIR4700-201ENST00000578311 74 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC019193.2-201ENST00000610012 634 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 AC099654.11-201ENST00000638857 294 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CISHQ9NSE2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.75□□□□□ -1.65
CISHQ9NSE2 TCP1P3-201ENST00000414406 1498 ntBASIC4.75□□□□□ -1.65
CISHQ9NSE2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CISHQ9NSE2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CISHQ9NSE2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CISHQ9NSE2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CISHQ9NSE2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CISHQ9NSE2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CISHQ9NSE2 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 RNA5SP307-201ENST00000362863 116 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 TMSB10P2-201ENST00000416049 131 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 UBE2V1P3-201ENST00000439651 417 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 CEACAMP9-201ENST00000442990 513 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 AC092905.1-201ENST00000467527 949 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 AC090013.1-201ENST00000485147 480 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms