Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC074029.2-201ENST00000551045 634 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 BNIP3P39-201ENST00000601077 554 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC090181.2-201ENST00000602975 672 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC091979.2-201ENST00000607514 214 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC084824.5-201ENST00000612009 413 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC074276.2-201ENST00000619891 348 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AL445528.2-201ENST00000620582 470 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AL590396.2-201ENST00000636511 1041 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 EOGT-210ENST00000615922 1931 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.96□□□□□ -1.61
SIX2Q9NPC8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.96□□□□□ -1.61
SIX2Q9NPC8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SIX2Q9NPC8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
SIX2Q9NPC8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SIX2Q9NPC8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SIX2Q9NPC8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 RNU6-697P-201ENST00000363348 107 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 MIR323B-201ENST00000385269 82 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC104837.2-201ENST00000427236 424 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 UBE2V1P6-201ENST00000430840 422 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC008072.1-201ENST00000434254 824 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 MTND2P30-201ENST00000456663 382 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 RN7SL817P-201ENST00000480777 288 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC016687.1-201ENST00000482574 353 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 NDUFB5P1-201ENST00000508134 564 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 SEC11B-201ENST00000518383 499 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC093591.2-201ENST00000565254 3843 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 UBE2FP2-201ENST00000566646 462 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC016180.1-201ENST00000567945 403 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 RPL7P50-201ENST00000600588 727 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AC023762.1-201ENST00000603280 584 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 CASC19-204ENST00000641001 2055 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 RBPJP2-201ENST00000618187 1444 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SIX2Q9NPC8 CDY11P-201ENST00000447168 1651 ntBASIC4.96□□□□□ -1.62
SIX2Q9NPC8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC021146.4-201ENST00000309229 279 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 RNU1-20P-201ENST00000363314 162 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 RNU6-316P-201ENST00000391027 107 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 EI24P3-201ENST00000399046 1062 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AL645733.1-201ENST00000402250 217 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 RN7SKP267-201ENST00000410381 285 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 MTND2P15-201ENST00000418575 892 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC073464.3-201ENST00000422564 712 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 VN1R54P-201ENST00000435210 1049 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 RAB9AP5-201ENST00000437794 597 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC016831.4-201ENST00000438302 307 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 RAB9AP2-201ENST00000443911 597 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC018638.3-201ENST00000461273 132 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 AC104629.1-201ENST00000494226 508 ntBASIC4.95□□□□□ -1.62
SIX2Q9NPC8 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SIX2Q9NPC8 NDUFA5P12-201ENST00000503796 343 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms