Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC097461.1-201ENST00000568928 2821 ntBASIC4.98□□□□□ -1.61
NXF3Q9H4D5 VN2R3P-201ENST00000422626 1412 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 FABP12P1-201ENST00000401911 322 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 AL080315.1-201ENST00000406055 466 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 NDUFA5P1-201ENST00000433858 341 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 GTF3AP5-201ENST00000442645 697 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 AL935212.3-201ENST00000450729 284 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 RN7SL385P-201ENST00000468873 276 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 AC023424.1-201ENST00000496058 459 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 IGLVIV-65-201ENST00000517313 360 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 AC006272.2-201ENST00000594725 163 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 AP005019.3-201ENST00000620418 560 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 UGT2B26P-201ENST00000508672 1613 ntBASIC4.97□□□□□ -1.61
NXF3Q9H4D5 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NXF3Q9H4D5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.96□□□□□ -1.61
NXF3Q9H4D5 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
NXF3Q9H4D5 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.96□□□□□ -1.61
NXF3Q9H4D5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
NXF3Q9H4D5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 RNA5SP296-201ENST00000410523 111 ntBASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 ISCUP1-201ENST00000454451 448 ntBASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 RPS23P7-201ENST00000466210 444 ntBASIC4.96□□□□□ -1.62
NXF3Q9H4D5 NIP7P2-201ENST00000485801 544 ntBASIC4.96□□□□□ -1.62
NXF3Q9H4D5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 MIR4472-2-201ENST00000582069 67 ntBASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AC005191.1-201ENST00000603950 358 ntBASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AL731566.2-201ENST00000618971 317 ntBASIC4.96□□□□□ -1.62
NXF3Q9H4D5 THAP12P5-201ENST00000405864 2275 ntBASIC4.96□□□□□ -1.62
NXF3Q9H4D5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NXF3Q9H4D5 AC025031.4-201ENST00000621248 3271 ntBASIC4.96□□□□□ -1.62
NXF3Q9H4D5 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 RPL23AP59-201ENST00000399415 461 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 SNORA81-201ENST00000408493 178 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AL034379.1-201ENST00000423216 253 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 RPS12P10-201ENST00000427031 377 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 EIF2S2P3-201ENST00000428356 999 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AP001324.1-201ENST00000428553 399 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 CBX1P1-201ENST00000440184 427 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AL157385.1-201ENST00000446973 268 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AC104651.2-201ENST00000447549 528 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AC011276.1-201ENST00000469688 323 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 PRELID3BP5-201ENST00000508612 460 ntBASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.95□□□□□ -1.62
NXF3Q9H4D5 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms