Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 CYCSP52-201ENST00000422857 310 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AKR1B10P1-201ENST00000425765 942 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC007742.1-201ENST00000425789 329 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 ZYG11AP1-201ENST00000430329 837 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 YWHAEP5-201ENST00000431545 765 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 FMO7P-201ENST00000436045 768 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 ELOCP26-201ENST00000436067 329 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 CXCR2P1-202ENST00000443392 1074 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 PDSS1P2-201ENST00000449397 678 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 MGAT2P1-201ENST00000449718 797 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC106800.3-201ENST00000511389 308 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 PTGES3P3-201ENST00000511479 482 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 CYP4F27P-201ENST00000514557 494 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 MTCO1P35-201ENST00000515270 228 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC087808.1-201ENST00000520501 361 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 TPRX1P1-201ENST00000557620 319 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 MIR4271-201ENST00000582451 67 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC008752.3-201ENST00000588113 712 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC005498.1-201ENST00000592125 465 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 DUXAP4-201ENST00000603046 613 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AL121655.1-201ENST00000605811 308 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC098614.4-201ENST00000607601 462 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AP005137.2-201ENST00000609238 400 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AL352984.2-201ENST00000611153 546 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AL121890.2-201ENST00000617644 465 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AL445670.1-201ENST00000618889 801 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 ZNF402P-201ENST00000404435 3100 ntBASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.32□□□□□ -1.56
SSBP3Q9BWW4 AC135352.1-201ENST00000506173 1418 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL359976.1-201ENST00000418655 3528 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC010624.4-201ENST00000597606 1351 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AP000547.3-204ENST00000588548 2523 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 OFD1P17-201ENST00000437639 3018 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 RNU1-65P-201ENST00000363919 148 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 RN7SKP237-201ENST00000364663 301 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.548-201ENST00000384656 105 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC007066.1-201ENST00000392902 381 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 RPL31P1-201ENST00000398116 372 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 HMGB3P18-201ENST00000406327 590 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 FAT1P1-201ENST00000406588 507 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL513174.1-201ENST00000423182 629 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms