Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RNU6-513P-201ENST00000516104 104 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 OR5D2P-201ENST00000524390 911 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 CR383656.6-201ENST00000550518 394 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AC091178.1-203ENST00000584586 279 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AP001160.4-201ENST00000596971 382 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 LINC01808-202ENST00000641680 1116 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AP001642.1-201ENST00000624727 2117 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.49□□□□□ -1.37
SIN3AQ96ST3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 UBE2V1P3-201ENST00000439651 417 ntBASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AL133372.1-201ENST00000493565 745 ntBASIC6.49□□□□□ -1.37
SIN3AQ96ST3 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AC113398.2-201ENST00000507630 558 ntBASIC6.49□□□□□ -1.37
SIN3AQ96ST3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AC147055.1-201ENST00000509261 750 ntBASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AC104785.1-201ENST00000603220 588 ntBASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AC120338.1-201ENST00000625074 1541 ntBASIC6.49□□□□□ -1.37
SIN3AQ96ST3 AC125257.1-201ENST00000560400 2930 ntBASIC6.49□□□□□ -1.37
SIN3AQ96ST3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SIN3AQ96ST3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 MAPK10-349ENST00000641767 3661 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 RNA5SP447-201ENST00000363749 119 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 MIR195-201ENST00000385194 87 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 ELOCP19-201ENST00000411919 318 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 RPL21P108-201ENST00000413857 481 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 AL807761.1-201ENST00000417622 171 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 HMGB1P32-201ENST00000425971 565 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 CYCSP42-201ENST00000450823 238 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 DHFRP3-201ENST00000455595 559 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 AC053481.1-201ENST00000467217 306 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 IGLVIV-65-201ENST00000517313 360 ntBASIC6.48□□□□□ -1.37
SIN3AQ96ST3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SIN3AQ96ST3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 Y_RNA.625-201ENST00000411256 107 ntBASIC6.47□□□□□ -1.37
SIN3AQ96ST3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 AC068287.1-201ENST00000430283 295 ntBASIC6.47□□□□□ -1.37
SIN3AQ96ST3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 RNA5SP464-201ENST00000516251 108 ntBASIC6.47□□□□□ -1.37
SIN3AQ96ST3 SNORD116-30-201ENST00000516468 85 ntBASIC6.47□□□□□ -1.37
SIN3AQ96ST3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 AC016911.1-201ENST00000613297 452 ntBASIC6.47□□□□□ -1.37
SIN3AQ96ST3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.47□□□□□ -1.37
SIN3AQ96ST3 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.46□□□□□ -1.37
SIN3AQ96ST3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
SIN3AQ96ST3 AP001002.1-201ENST00000625148 1513 ntBASIC6.46□□□□□ -1.37
SIN3AQ96ST3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SIN3AQ96ST3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
SIN3AQ96ST3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SIN3AQ96ST3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SIN3AQ96ST3 RN7SKP216-201ENST00000411050 312 ntBASIC6.46□□□□□ -1.38
SIN3AQ96ST3 AC245028.1-201ENST00000423259 256 ntBASIC6.46□□□□□ -1.38
SIN3AQ96ST3 NDUFA5P1-201ENST00000433858 341 ntBASIC6.46□□□□□ -1.38
SIN3AQ96ST3 MTND2P28-201ENST00000457540 1044 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms