Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
TRIM47Q96LD4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 NEPNP-201ENST00000404786 1371 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC007382.1-201ENST00000624376 2618 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 CR383658.2-201ENST00000547576 1525 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 RNU6-1331P-201ENST00000363658 106 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 Y_RNA.315-201ENST00000365117 102 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 RNU6-639P-201ENST00000384074 107 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 RNU6-483P-201ENST00000384088 108 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 Y_RNA.476-201ENST00000384347 108 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 SNRPEP2-201ENST00000397592 279 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AL359694.1-201ENST00000403247 604 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 RPSAP65-201ENST00000429660 595 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AL365400.1-201ENST00000431854 640 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 CLUHP1-201ENST00000435012 1190 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 SNRPEP4-201ENST00000435815 279 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 RNU6-1208P-201ENST00000459588 107 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 Y_RNA.631-201ENST00000459607 101 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 RN7SL254P-201ENST00000460609 284 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 RPL15P21-201ENST00000495592 567 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 RNU6-1271P-201ENST00000517049 105 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 RNU6-789P-201ENST00000517105 102 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 COX6B1P4-201ENST00000519826 484 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 OR4C2P-201ENST00000530855 1064 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 NANOGNBP2-201ENST00000544753 553 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC009220.3-201ENST00000604318 586 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AL355974.3-201ENST00000617383 467 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC136475.10-201ENST00000620253 385 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 SMG1P5-202ENST00000529428 4219 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 SMG1P2-201ENST00000566127 4221 ntBASIC7.74□□□□□ -1.17
TRIM47Q96LD4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM47Q96LD4 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM47Q96LD4 SNORA51.1-201ENST00000363243 140 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 RNU1-84P-201ENST00000365447 164 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 LCN1P2-201ENST00000372030 223 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 RNU6-185P-201ENST00000384421 107 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 ST13P16-201ENST00000401760 781 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AL122016.1-201ENST00000403365 367 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 GSTA9P-201ENST00000406231 611 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 VN1R8P-201ENST00000407739 893 ntBASIC7.73□□□□□ -1.17
TRIM47Q96LD4 AL391987.1-201ENST00000441025 200 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms