Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AP002906.1-201ENST00000603405 233 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC011374.2-201ENST00000607135 526 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC007204.2-201ENST00000615022 616 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC009464.1-201ENST00000615731 469 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AL121890.2-201ENST00000617644 465 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AP000676.4-201ENST00000624659 623 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC008079.2-201ENST00000623543 20396 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 ADAM24P-201ENST00000398655 2101 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 RNU1-149P-201ENST00000390870 161 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AL390774.1-201ENST00000411924 246 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 HIGD1AP15-201ENST00000416198 280 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC092648.1-201ENST00000425870 423 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC245047.2-201ENST00000441060 530 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 HSFY3P-201ENST00000444242 1191 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AL591719.1-201ENST00000444669 744 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC092685.1-201ENST00000447960 1243 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AL591363.1-201ENST00000450091 483 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC104634.1-201ENST00000452720 462 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC092155.2-201ENST00000454675 477 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 SIAH1P1-201ENST00000479411 923 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC108693.1-201ENST00000496068 432 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 RNU6-311P-201ENST00000516224 102 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 snoU109.6-201ENST00000516831 118 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC022022.2-201ENST00000602989 360 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 PART1_2.1-201ENST00000612397 250 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC073569.3-201ENST00000619055 682 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AL035461.2-201ENST00000619201 524 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC006386.1-201ENST00000619436 415 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC104985.3-201ENST00000623479 597 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 MIR4302-201ENST00000638058 60 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC139713.2-210ENST00000641741 992 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 VN2R3P-201ENST00000422626 1412 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 AC027228.2-201ENST00000567141 2154 ntBASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDK5RAP3Q96JB5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CDK5RAP3Q96JB5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.96□□□□□ -1.45
CDK5RAP3Q96JB5 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
CDK5RAP3Q96JB5 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 RNA5SP27-201ENST00000363839 119 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 RNA5SP339-201ENST00000390987 122 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 SNORA48.4-201ENST00000391089 134 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AL512422.1-201ENST00000407033 553 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 OR5M12P-201ENST00000423388 929 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 XKRYP1-201ENST00000423438 492 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 CHEK2P5-201ENST00000423877 246 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 XKRYP2-201ENST00000432915 492 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 SPRYD7P1-201ENST00000443861 570 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 RPL34P26-201ENST00000445636 354 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AC016724.1-201ENST00000453215 421 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AL035090.1-201ENST00000454835 332 ntBASIC5.96□□□□□ -1.46
CDK5RAP3Q96JB5 AC113420.1-201ENST00000507903 571 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms