Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 RNA5SP131-201ENST00000365452 119 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 RNA5SP30-201ENST00000365552 115 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC233289.1-201ENST00000403700 508 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 RPSAP35-201ENST00000413753 818 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AL133173.1-201ENST00000423458 397 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AL138787.1-202ENST00000437804 898 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 NPM1P33-201ENST00000438918 872 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 RPL6P5-201ENST00000445678 828 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DDX11Q96FC9 NPM1P13-201ENST00000452663 865 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 RPS27AP8-201ENST00000452665 445 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 RN7SL515P-201ENST00000463999 297 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC100832.1-201ENST00000471945 383 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC105918.1-201ENST00000474399 838 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 RPS17P5-201ENST00000498293 408 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC026414.1-201ENST00000504046 698 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC111000.2-201ENST00000507775 550 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 GLUD1P3-202ENST00000508551 200 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 SNORA70.11-201ENST00000515987 138 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 SNORA70.13-201ENST00000516116 138 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC023813.2-201ENST00000564321 469 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 FKBP1AP1-201ENST00000594588 318 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC105129.3-201ENST00000605455 485 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC073137.1-201ENST00000605636 634 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 OR2AS2P-201ENST00000606902 342 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC239868.4-201ENST00000608318 671 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 AL359513.1-201ENST00000614364 557 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 AC005840.5-201ENST00000619166 599 ntBASIC6.56□□□□□ -1.36
DDX11Q96FC9 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.56□□□□□ -1.36
DDX11Q96FC9 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DDX11Q96FC9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DDX11Q96FC9 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX11Q96FC9 OR10AB1P-202ENST00000641219 1686 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX11Q96FC9 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX11Q96FC9 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX11Q96FC9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 AL360270.2-201ENST00000562952 5985 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX11Q96FC9 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX11Q96FC9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX11Q96FC9 RNA5SP319-201ENST00000362768 119 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 RNU1-19P-201ENST00000363306 165 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 Y_RNA.194-201ENST00000363985 102 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 SNORA74A-201ENST00000364089 198 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 GAPDHP42-201ENST00000406848 981 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 MIR1286-201ENST00000408112 78 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 RNU4-34P-201ENST00000410431 124 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 RAP1BP1-201ENST00000412709 553 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 PTP4A1P5-201ENST00000420305 455 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 RPS27AP6-201ENST00000427962 448 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 EXTL2P1-201ENST00000446218 416 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 STRADBP1-201ENST00000478954 1281 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 RPS27AP16-201ENST00000492222 470 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 RPF2P2-201ENST00000504693 896 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 AC110775.1-201ENST00000513721 462 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 MTCO2P32-201ENST00000514865 403 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 RNU6-1028P-201ENST00000517164 93 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 NRON-201ENST00000517270 370 ntBASIC6.55□□□□□ -1.36
DDX11Q96FC9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
DDX11Q96FC9 AL512310.9-201ENST00000553311 948 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms