Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC008521.2-201ENST00000591021 259 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC079880.2-201ENST00000603790 1213 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 BNIP3P35-201ENST00000604530 490 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AC011374.2-201ENST00000607135 526 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 AL353600.1-201ENST00000608148 251 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.49□□□□□ -1.69
RFT1Q96AA3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RFT1Q96AA3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFT1Q96AA3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AL133268.1-201ENST00000405676 1401 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 RNA5SP335-201ENST00000363817 110 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 RNU6-304P-201ENST00000364855 107 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 RNU6-650P-201ENST00000365658 111 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 LINC01347-201ENST00000417964 355 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 CYCSP10-201ENST00000417973 294 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 TMBIM7P-201ENST00000418074 855 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 RPS26P47-201ENST00000427219 348 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC009238.2-201ENST00000431026 355 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 PTP4A1P3-201ENST00000433661 420 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 CYCSP6-201ENST00000434498 302 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 RPL23AP19-201ENST00000436229 369 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AL354710.1-201ENST00000453641 246 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 RPL5P30-201ENST00000465511 891 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC078857.1-201ENST00000469870 667 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC100832.1-201ENST00000471945 383 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 RN7SL214P-201ENST00000487317 265 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 RPEP1-201ENST00000504507 658 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 HMGB3P13-201ENST00000511263 607 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 TCP11X3P-202ENST00000514289 1254 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 ENPP7P9-201ENST00000514456 627 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 RPL10P14-201ENST00000565265 298 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 MIR548Y-201ENST00000582739 110 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 RN7SL52P-201ENST00000584271 284 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC005034.4-201ENST00000603612 899 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC010435.1-201ENST00000623353 1177 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 TLK1P1-201ENST00000456760 2440 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.48□□□□□ -1.69
RFT1Q96AA3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RFT1Q96AA3 AC090017.1-201ENST00000548612 1779 ntBASIC4.48□□□□□ -1.69
RFT1Q96AA3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 DDX18P4-201ENST00000511690 1966 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 MTND5P11-201ENST00000511037 1812 ntBASIC4.47□□□□□ -1.69
RFT1Q96AA3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RFT1Q96AA3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RFT1Q96AA3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms