Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 OTX2P1-201ENST00000450956 354 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 OR2AF1P-201ENST00000454899 889 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 HSPE1P22-201ENST00000456856 327 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC005410.1-202ENST00000460347 485 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 PRDX3P4-201ENST00000470828 747 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 EIF3LP3-201ENST00000495197 822 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 PFN1P8-201ENST00000497012 543 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC090638.1-201ENST00000498296 909 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 CDH12P2-201ENST00000504393 298 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC034244.1-201ENST00000507687 207 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC119751.1-201ENST00000513357 765 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 SNORA3.4-201ENST00000515969 96 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 IGHV3-63-201ENST00000518422 341 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 YWHABP2-201ENST00000540201 713 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC006518.2-201ENST00000542513 940 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 DUXAP6-201ENST00000553858 601 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 MIR1273E-201ENST00000581165 102 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC005252.1-201ENST00000604518 1063 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AL121594.5-201ENST00000631724 573 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 AC063976.2-201ENST00000425667 3556 ntBASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
ATG4AQ8WYN0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AP005432.1-201ENST00000580891 3485 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 RNU4-31P-201ENST00000384211 141 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 MIR142-201ENST00000384835 87 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 HSPA8P15-201ENST00000401676 786 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 FCF1P5-201ENST00000406490 482 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 MTND2P18-201ENST00000419962 1030 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 VN2R3P-201ENST00000422626 1412 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 CLUHP1-201ENST00000435012 1190 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AC007998.1-201ENST00000474156 672 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 MTND2P14-201ENST00000482139 351 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AC092593.2-201ENST00000513866 913 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 SNORA70.11-201ENST00000515987 138 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 SNORA70.13-201ENST00000516116 138 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AL109741.3-201ENST00000561748 592 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 MTND4LP24-201ENST00000572277 291 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 RN7SL708P-201ENST00000580952 299 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AC069366.1-201ENST00000583159 838 ntBASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
ATG4AQ8WYN0 AC091057.2-201ENST00000602594 792 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms