Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.83□□□□□ -1.64
DNAAF1Q8NEP3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 RNA5SP273-201ENST00000362484 113 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 RNU4-68P-201ENST00000364314 141 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 MIR513B-201ENST00000385136 84 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 PPIAP9-201ENST00000403866 498 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL136310.1-201ENST00000404926 654 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 MIR1203-201ENST00000408812 85 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 RNU2-6P-201ENST00000411404 190 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 PCNPP4-201ENST00000414817 517 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC114814.2-201ENST00000419195 485 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 KRR1P1-201ENST00000419430 803 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL513175.2-201ENST00000422071 443 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 NANOGP2-201ENST00000435391 727 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC234064.1-201ENST00000436312 247 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 HMGB3P6-201ENST00000444896 598 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 TPTE2P6-202ENST00000445572 1007 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 YWHAQP9-201ENST00000445891 512 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC022215.1-201ENST00000481770 362 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC073522.1-201ENST00000483312 377 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC004815.1-201ENST00000484185 331 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL117692.1-201ENST00000494283 713 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 NENFP3-201ENST00000503735 313 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC025458.1-201ENST00000506046 166 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC021106.1-201ENST00000509020 1058 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC091912.1-201ENST00000511351 248 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 Y_RNA.667-201ENST00000516212 107 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 RNU6-416P-201ENST00000516265 103 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 IGJP1-201ENST00000522682 475 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 SULT1C2P2-201ENST00000562517 294 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 VN1R88P-201ENST00000596787 292 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC063977.5-201ENST00000601044 974 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC108738.1-201ENST00000603703 237 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 Z99289.3-201ENST00000605586 594 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL583856.2-201ENST00000606298 543 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 MIR6889-201ENST00000613185 59 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC139769.3-201ENST00000618383 175 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AP000676.4-201ENST00000624659 623 ntBASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
DNAAF1Q8NEP3 AL450345.1-202ENST00000605741 3881 ntBASIC4.81□□□□□ -1.64
DNAAF1Q8NEP3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
DNAAF1Q8NEP3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DNAAF1Q8NEP3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
DNAAF1Q8NEP3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DNAAF1Q8NEP3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DNAAF1Q8NEP3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
DNAAF1Q8NEP3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.81□□□□□ -1.64
DNAAF1Q8NEP3 AC096656.1-201ENST00000623826 1364 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms