Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AL121601.2-201ENST00000438019 707 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 OR3D1P-201ENST00000438288 955 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 RAB11AP1-201ENST00000442978 646 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AL592447.1-201ENST00000447592 540 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 SNRPFP4-201ENST00000456366 242 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 NXT1P1-201ENST00000458481 316 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 BNIP3P41-201ENST00000503774 571 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 ARL2BPP4-201ENST00000506854 471 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC109464.2-201ENST00000510242 943 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC090958.1-201ENST00000511122 351 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 RNU6-202P-201ENST00000515998 96 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 snoU109.6-201ENST00000516831 118 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 ZNF519P3-201ENST00000557158 1032 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 MIR548S-201ENST00000581352 82 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 TUG1_1.1-201ENST00000610654 145 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 RFPL4AP6-201ENST00000616792 846 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC245014.3-201ENST00000618589 347 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 MIR7159-201ENST00000620587 66 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC090017.1-201ENST00000548612 1779 ntBASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
NPAS4Q8IUM7 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC010168.2-201ENST00000562691 5428 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 PABPC1P9-201ENST00000426076 1612 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 RNA5SP477-201ENST00000362639 119 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 RNU6-251P-201ENST00000363235 104 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 RNU6-723P-201ENST00000383973 107 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 RNU2-28P-201ENST00000410457 189 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 RPL21P108-201ENST00000413857 481 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AL513325.1-201ENST00000417716 1034 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AL953862.1-201ENST00000423016 168 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 FTH1P10-202ENST00000430907 550 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AL590399.4-201ENST00000436561 601 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC005297.1-201ENST00000444765 862 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC012123.2-201ENST00000485809 248 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 PPIAP19-201ENST00000486414 492 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 HMGN2P25-201ENST00000486956 268 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC087883.1-201ENST00000551882 391 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 RPA2P1-201ENST00000556557 721 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AL606834.2-201ENST00000602954 668 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AL359704.2-201ENST00000604335 521 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 NDUFA8P1-201ENST00000605525 367 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 CUBNP3-201ENST00000457461 1784 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 AC135352.1-201ENST00000506173 1418 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 USP9YP4-201ENST00000424401 1745 ntBASIC6.81□□□□□ -1.32
NPAS4Q8IUM7 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms