Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL022393.1-201ENST00000625142 1677 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 SNORA17.1-201ENST00000362945 126 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 HNRNPDP2-201ENST00000406475 478 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 RN7SKP114-201ENST00000410327 279 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC007738.1-201ENST00000413892 348 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 RPL22P18-201ENST00000417197 377 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 MORF4L1P6-201ENST00000418771 268 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC104333.2-201ENST00000422630 192 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 RPS7P2-201ENST00000435134 607 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 MTND4P32-201ENST00000437189 1237 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 ARL5AP3-201ENST00000439327 386 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC012512.1-201ENST00000446594 718 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 RN7SL443P-201ENST00000464331 290 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC004263.1-201ENST00000479327 332 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 RPL7P39-201ENST00000481157 744 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 RN7SL441P-201ENST00000492388 296 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC112518.2-201ENST00000508565 425 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 HMGB1P47-201ENST00000511281 589 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 RNU6-276P-201ENST00000516114 96 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 Y_RNA.688-201ENST00000516565 95 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 NOP56P3-201ENST00000549457 385 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL512310.9-201ENST00000553311 948 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC009097.3-201ENST00000563557 1018 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 MIR3176-201ENST00000582210 90 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AP002802.2-201ENST00000605877 235 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL512329.2-201ENST00000607350 548 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 OR7A19P-201ENST00000608051 733 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC126915.2-201ENST00000610957 190 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AP000648.2-201ENST00000624182 404 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AL121594.5-201ENST00000631724 573 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 SMG1P4-204ENST00000523028 4131 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 AP001284.1-201ENST00000528393 2118 ntBASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
ZNF549Q6P9A3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 AC125336.1-201ENST00000508893 2827 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 RNU6-468P-201ENST00000384003 109 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 SNORD116-8-201ENST00000384365 95 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 AC119751.3-201ENST00000399720 670 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 NACAP7-201ENST00000407371 609 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 RN7SKP126-201ENST00000411143 300 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 AC211486.3-201ENST00000412694 621 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 RANP4-201ENST00000413361 655 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 DPPA2P2-201ENST00000418220 897 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 NANOGP4-201ENST00000427230 913 ntBASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.02□□□□□ -1.61
ZNF549Q6P9A3 AL450023.3-201ENST00000440592 271 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms