Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 OR7E157P-201ENST00000494376 911 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 CCDC11P1-201ENST00000503137 1162 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC138938.1-201ENST00000515431 782 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC078899.1-201ENST00000521432 1185 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AL049872.1-201ENST00000556323 322 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AGGF1P6-201ENST00000569213 976 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC005412.1-201ENST00000580812 1049 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC069545.1-201ENST00000605671 358 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC211433.2-201ENST00000608433 387 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC008115.3-201ENST00000614874 549 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC022509.4-201ENST00000621404 572 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC079776.5-201ENST00000641920 211 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 Z95114.1-201ENST00000624264 14574 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC026523.2-201ENST00000625039 7739 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 RNU6-1214P-201ENST00000363650 109 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 SNORD116.1-201ENST00000365628 92 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 Y_RNA.465-201ENST00000384293 102 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 RN7SKP166-201ENST00000410812 305 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC007435.1-201ENST00000421086 415 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 TNPO1P1-201ENST00000423641 1138 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 MGAT2P2-201ENST00000427194 797 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL627308.1-201ENST00000435693 821 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC012075.1-201ENST00000436549 580 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 MTND2P40-201ENST00000436718 841 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 CYCSP51-201ENST00000443545 318 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 SPRYD7P1-201ENST00000443861 570 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 RPS23P9-201ENST00000448848 438 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC091951.3-201ENST00000504093 246 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 ZNF321P-202ENST00000550843 495 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 NBEAP1-201ENST00000554452 979 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL354943.1-201ENST00000572103 781 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 MIR1269B-201ENST00000580405 75 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 PSMA6P4-201ENST00000603247 718 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AP004247.3-201ENST00000608682 624 ntBASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
CCDC144BQ3MJ40 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms