Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.8□□□□□ -1.64
EFNB1P98172 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 RN7SKP153-201ENST00000365026 316 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 SUGT1P2-201ENST00000379452 992 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 SNORD116-12-201ENST00000384468 92 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AC005522.1-201ENST00000395416 346 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 HMGB1P20-201ENST00000402555 677 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 NCSTNP1-201ENST00000406229 144 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.8□□□□□ -1.64
EFNB1P98172 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 GNG5P5-201ENST00000420444 220 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 AL009174.1-201ENST00000426577 416 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 NANOGP4-201ENST00000427230 913 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 RPL7P4-203ENST00000430239 730 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 ACTR3P2-201ENST00000439585 1257 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 CYCSP24-201ENST00000445119 316 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 AL672138.1-201ENST00000450604 1015 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 MRPL35P4-201ENST00000453682 566 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.8□□□□□ -1.64
EFNB1P98172 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
EFNB1P98172 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 AC023424.1-201ENST00000496058 459 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 MTND6P2-201ENST00000512226 524 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 SNORA70.20-201ENST00000516848 126 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.8□□□□□ -1.64
EFNB1P98172 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 AC068993.1-201ENST00000546724 589 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 AC026826.3-201ENST00000561747 158 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 CCDC58P1-201ENST00000578567 430 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.8□□□□□ -1.64
EFNB1P98172 AL583856.2-201ENST00000606298 543 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 AC116447.1-201ENST00000613153 453 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 AC108359.1-201ENST00000616451 1211 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AC008147.4-201ENST00000617570 1204 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AL121895.2-201ENST00000619558 447 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 OR1S1-201ENST00000624470 978 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AC129915.3-201ENST00000634128 948 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AC103703.1-201ENST00000634783 663 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AC009452.1-201ENST00000640823 606 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 AC087565.3-203ENST00000641018 837 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 AL353743.4-201ENST00000422653 1547 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
EFNB1P98172 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 AC000374.1-201ENST00000434698 1745 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.8□□□□□ -1.64
EFNB1P98172 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EFNB1P98172 AC099786.3-201ENST00000565735 1410 ntBASIC4.8□□□□□ -1.64
EFNB1P98172 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.8□□□□□ -1.64
EFNB1P98172 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
EFNB1P98172 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
EFNB1P98172 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNB1P98172 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EFNB1P98172 AC023421.1-201ENST00000590535 1785 ntBASIC4.79□□□□□ -1.64
EFNB1P98172 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.79□□□□□ -1.64
EFNB1P98172 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNB1P98172 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
EFNB1P98172 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
EFNB1P98172 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
EFNB1P98172 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EFNB1P98172 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
EFNB1P98172 SNORA51.12-201ENST00000384448 134 ntBASIC4.79□□□□□ -1.64
EFNB1P98172 MIR589-201ENST00000385238 99 ntBASIC4.79□□□□□ -1.64
EFNB1P98172 EI24P3-201ENST00000399046 1062 ntBASIC4.79□□□□□ -1.64
EFNB1P98172 MIR1275-201ENST00000408770 80 ntBASIC4.79□□□□□ -1.64
EFNB1P98172 RN7SKP59-201ENST00000410520 314 ntBASIC4.79□□□□□ -1.64
EFNB1P98172 RNU4-22P-201ENST00000411058 166 ntBASIC4.79□□□□□ -1.64
EFNB1P98172 RNU6-603P-201ENST00000411403 107 ntBASIC4.79□□□□□ -1.64
EFNB1P98172 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNB1P98172 AC007738.1-201ENST00000413892 348 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms