Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 AC109583.2-201ENST00000617367 129 ntBASIC5.1□□□□□ -1.59
RAE1P78406 MIR6778-201ENST00000617912 73 ntBASIC5.1□□□□□ -1.59
RAE1P78406 VN1R7P-201ENST00000619242 903 ntBASIC5.1□□□□□ -1.59
RAE1P78406 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 AC145207.9-201ENST00000623802 325 ntBASIC5.1□□□□□ -1.59
RAE1P78406 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.1□□□□□ -1.59
RAE1P78406 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RAE1P78406 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RAE1P78406 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RAE1P78406 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.09□□□□□ -1.59
RAE1P78406 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.09□□□□□ -1.59
RAE1P78406 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
RAE1P78406 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.09□□□□□ -1.59
RAE1P78406 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RAE1P78406 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RAE1P78406 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RAE1P78406 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RAE1P78406 NSRP1P1-201ENST00000444067 1693 ntBASIC5.09□□□□□ -1.59
RAE1P78406 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
RAE1P78406 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RAE1P78406 TMSB4XP4-201ENST00000323496 618 ntBASIC5.09□□□□□ -1.59
RAE1P78406 RNU6-1214P-201ENST00000363650 109 ntBASIC5.09□□□□□ -1.59
RAE1P78406 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RAE1P78406 SNORD116-8-201ENST00000384365 95 ntBASIC5.09□□□□□ -1.59
RAE1P78406 SNORA48.4-201ENST00000391089 134 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AL031985.1-201ENST00000392713 418 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AL136131.1-201ENST00000406079 803 ntBASIC5.09□□□□□ -1.59
RAE1P78406 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RAE1P78406 AL008987.1-201ENST00000415528 237 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 RPF2P1-201ENST00000424137 906 ntBASIC5.09□□□□□ -1.59
RAE1P78406 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.09□□□□□ -1.59
RAE1P78406 TXNL1P1-201ENST00000429528 554 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 RPS29P14-201ENST00000431518 171 ntBASIC5.09□□□□□ -1.59
RAE1P78406 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.09□□□□□ -1.59
RAE1P78406 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 OR52E3P-201ENST00000452083 936 ntBASIC5.09□□□□□ -1.59
RAE1P78406 OR52E7P-201ENST00000452394 933 ntBASIC5.09□□□□□ -1.59
RAE1P78406 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.09□□□□□ -1.59
RAE1P78406 RPL35AP19-201ENST00000469425 329 ntBASIC5.09□□□□□ -1.59
RAE1P78406 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.09□□□□□ -1.59
RAE1P78406 AC104687.1-201ENST00000485829 412 ntBASIC5.09□□□□□ -1.59
RAE1P78406 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 AC091951.3-201ENST00000504093 246 ntBASIC5.09□□□□□ -1.59
RAE1P78406 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 AC098976.1-201ENST00000513014 541 ntBASIC5.09□□□□□ -1.59
RAE1P78406 snoZ278.1-201ENST00000517059 112 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.09□□□□□ -1.59
RAE1P78406 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.09□□□□□ -1.59
RAE1P78406 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.09□□□□□ -1.59
RAE1P78406 OR4A2P-201ENST00000527276 913 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.09□□□□□ -1.59
RAE1P78406 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.09□□□□□ -1.59
RAE1P78406 MTCYBP27-201ENST00000555160 670 ntBASIC5.09□□□□□ -1.59
RAE1P78406 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.09□□□□□ -1.59
RAE1P78406 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 AC090888.3-201ENST00000558917 509 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.09□□□□□ -1.59
RAE1P78406 MIR3614-201ENST00000581261 86 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AP001269.3-201ENST00000588718 329 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.09□□□□□ -1.59
RAE1P78406 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.09□□□□□ -1.59
RAE1P78406 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.09□□□□□ -1.59
RAE1P78406 AC084782.3-201ENST00000612282 578 ntBASIC5.09□□□□□ -1.59
RAE1P78406 VN1R74P-201ENST00000613259 503 ntBASIC5.09□□□□□ -1.59
RAE1P78406 MIR6839-201ENST00000620425 113 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AC127024.6-201ENST00000621598 424 ntBASIC5.09□□□□□ -1.59
RAE1P78406 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.09□□□□□ -1.59
RAE1P78406 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RAE1P78406 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RAE1P78406 AC092376.2-201ENST00000622621 4116 ntBASIC5.09□□□□□ -1.59
RAE1P78406 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
RAE1P78406 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RAE1P78406 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.08□□□□□ -1.6
RAE1P78406 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.08□□□□□ -1.6
RAE1P78406 AC002525.1-201ENST00000624392 1622 ntBASIC5.08□□□□□ -1.6
RAE1P78406 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 AC093671.1-201ENST00000624981 2929 ntBASIC5.08□□□□□ -1.6
RAE1P78406 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
RAE1P78406 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RAE1P78406 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAE1P78406 AC104446.1-201ENST00000613728 1321 ntBASIC5.08□□□□□ -1.6
RAE1P78406 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.08□□□□□ -1.6
RAE1P78406 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms