Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 ATG4AP1-201ENST00000416893 538 ntBASIC5.04□□□□□ -1.6
TNNC1P63316 AC140479.3-201ENST00000418944 1126 ntBASIC5.04□□□□□ -1.6
TNNC1P63316 AC097523.2-201ENST00000435551 652 ntBASIC5.04□□□□□ -1.6
TNNC1P63316 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.04□□□□□ -1.6
TNNC1P63316 OR11I1P-201ENST00000486033 954 ntBASIC5.04□□□□□ -1.6
TNNC1P63316 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TNNC1P63316 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.04□□□□□ -1.6
TNNC1P63316 RNU6-943P-201ENST00000516960 98 ntBASIC5.04□□□□□ -1.6
TNNC1P63316 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TNNC1P63316 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.04□□□□□ -1.6
TNNC1P63316 AC026979.4-201ENST00000606555 645 ntBASIC5.04□□□□□ -1.6
TNNC1P63316 AL122125.1-201ENST00000616999 600 ntBASIC5.04□□□□□ -1.6
TNNC1P63316 AC006840.1-201ENST00000623069 542 ntBASIC5.04□□□□□ -1.6
TNNC1P63316 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.04□□□□□ -1.6
TNNC1P63316 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TNNC1P63316 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.04□□□□□ -1.6
TNNC1P63316 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
TNNC1P63316 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.04□□□□□ -1.6
TNNC1P63316 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
TNNC1P63316 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
TNNC1P63316 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.04□□□□□ -1.6
TNNC1P63316 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.03□□□□□ -1.6
TNNC1P63316 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNNC1P63316 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
TNNC1P63316 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TNNC1P63316 AP001002.1-201ENST00000625148 1513 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TNNC1P63316 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNNC1P63316 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNNC1P63316 SNORA71.2-201ENST00000364941 134 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TNNC1P63316 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.03□□□□□ -1.6
TNNC1P63316 HDGFP1-201ENST00000405943 252 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 RNA5SP146-201ENST00000410743 123 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 RN7SKP106-201ENST00000410832 272 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 RPL37P18-201ENST00000411602 243 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.03□□□□□ -1.6
TNNC1P63316 AC073264.2-201ENST00000448886 166 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 RN7SL41P-201ENST00000476144 297 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.03□□□□□ -1.6
TNNC1P63316 RPL21P6-201ENST00000479171 504 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 OR9N1P-201ENST00000491296 333 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.03□□□□□ -1.6
TNNC1P63316 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.03□□□□□ -1.6
TNNC1P63316 AC063949.1-201ENST00000552900 865 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.03□□□□□ -1.6
TNNC1P63316 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.03□□□□□ -1.6
TNNC1P63316 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.03□□□□□ -1.6
TNNC1P63316 QTRT1P1-201ENST00000604344 1078 ntBASIC5.03□□□□□ -1.6
TNNC1P63316 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TNNC1P63316 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TNNC1P63316 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.03□□□□□ -1.6
TNNC1P63316 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TNNC1P63316 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TNNC1P63316 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.03□□□□□ -1.6
TNNC1P63316 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TNNC1P63316 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.02□□□□□ -1.61
TNNC1P63316 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.02□□□□□ -1.61
TNNC1P63316 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNNC1P63316 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNNC1P63316 RN7SKP115-201ENST00000363177 317 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNNC1P63316 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.02□□□□□ -1.61
TNNC1P63316 RNA5SP296-201ENST00000410523 111 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.02□□□□□ -1.61
TNNC1P63316 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.02□□□□□ -1.61
TNNC1P63316 OR13Z1P-201ENST00000416141 834 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 AC019050.1-201ENST00000418508 492 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 RPL7P57-201ENST00000423238 740 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 RPL36AP15-201ENST00000444514 266 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.02□□□□□ -1.61
TNNC1P63316 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.02□□□□□ -1.61
TNNC1P63316 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.02□□□□□ -1.61
TNNC1P63316 RPL12P20-201ENST00000475538 479 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 RPL23AP65-201ENST00000475608 468 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
TNNC1P63316 AC007686.1-201ENST00000488511 463 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 STMN1P2-201ENST00000508435 439 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 OR5M2P-201ENST00000529003 936 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TNNC1P63316 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNNC1P63316 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.02□□□□□ -1.61
TNNC1P63316 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.02□□□□□ -1.61
TNNC1P63316 AC005520.3-201ENST00000602874 370 ntBASIC5.02□□□□□ -1.61
TNNC1P63316 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.02□□□□□ -1.61
TNNC1P63316 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNNC1P63316 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNNC1P63316 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNNC1P63316 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TNNC1P63316 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNNC1P63316 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.01□□□□□ -1.61
TNNC1P63316 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNNC1P63316 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNNC1P63316 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNNC1P63316 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNNC1P63316 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNNC1P63316 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.01□□□□□ -1.61
TNNC1P63316 RNVU1-6-201ENST00000364688 164 ntBASIC5.01□□□□□ -1.61
TNNC1P63316 RPS16P5-201ENST00000406501 404 ntBASIC5.01□□□□□ -1.61
TNNC1P63316 AL590139.1-201ENST00000416267 400 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms