Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS3AP61247 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.03□□□□□ -1.6
RPS3AP61247 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS3AP61247 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.03□□□□□ -1.6
RPS3AP61247 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS3AP61247 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS3AP61247 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RPS3AP61247 RNU5B-4P-201ENST00000363508 111 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 RNU6-178P-201ENST00000384631 104 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 RNU6-932P-201ENST00000391108 106 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 DNAJC19P6-201ENST00000401853 280 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 OR3A2-201ENST00000408891 1076 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.03□□□□□ -1.6
RPS3AP61247 Z93019.1-201ENST00000416450 973 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AC073069.1-201ENST00000428657 441 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 AC073465.2-201ENST00000440938 498 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 TPTE2P6-202ENST00000445572 1007 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 Z95152.1-201ENST00000453556 656 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AC011225.1-201ENST00000457751 369 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.03□□□□□ -1.6
RPS3AP61247 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.03□□□□□ -1.6
RPS3AP61247 AC104108.1-201ENST00000509930 412 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AC138938.1-201ENST00000515431 782 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.03□□□□□ -1.6
RPS3AP61247 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.03□□□□□ -1.6
RPS3AP61247 HSPE1P2-201ENST00000554777 306 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.03□□□□□ -1.6
RPS3AP61247 MIR4789-201ENST00000577469 82 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.03□□□□□ -1.6
RPS3AP61247 MIR1273E-201ENST00000581165 102 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.03□□□□□ -1.6
RPS3AP61247 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 BNIP3P39-201ENST00000601077 554 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AL355816.1-201ENST00000607951 118 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AL391834.2-201ENST00000609982 546 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 MIR6862-1-201ENST00000613016 70 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 MIR6862-2-201ENST00000614755 70 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AL121890.3-201ENST00000618494 516 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AC009269.6-201ENST00000621778 588 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 AL590396.2-201ENST00000636511 1041 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS3AP61247 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS3AP61247 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RPS3AP61247 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPS3AP61247 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RPS3AP61247 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.03□□□□□ -1.6
RPS3AP61247 HSPA8P18-201ENST00000439846 1928 ntBASIC5.03□□□□□ -1.6
RPS3AP61247 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPS3AP61247 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.03□□□□□ -1.6
RPS3AP61247 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPS3AP61247 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPS3AP61247 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
RPS3AP61247 AL450345.1-202ENST00000605741 3881 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RPS3AP61247 CASC19-204ENST00000641001 2055 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPS3AP61247 RN7SKP6-201ENST00000364795 319 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AC005522.1-201ENST00000395416 346 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AL078599.1-201ENST00000402075 293 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.02□□□□□ -1.61
RPS3AP61247 AC013410.2-201ENST00000422627 201 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AC009965.2-201ENST00000425328 970 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 RPS26P47-201ENST00000427219 348 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.02□□□□□ -1.61
RPS3AP61247 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.02□□□□□ -1.61
RPS3AP61247 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RPS3AP61247 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPS3AP61247 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.02□□□□□ -1.61
RPS3AP61247 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.02□□□□□ -1.61
RPS3AP61247 NANOGP9-201ENST00000439890 892 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.02□□□□□ -1.61
RPS3AP61247 AL450023.1-201ENST00000450868 751 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RPS3AP61247 OR2AF1P-201ENST00000454899 889 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AC022795.1-201ENST00000473808 480 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 RPS4XP6-201ENST00000477670 797 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AC093801.2-201ENST00000503966 1050 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.02□□□□□ -1.61
RPS3AP61247 HMGB1P19-201ENST00000517578 577 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.02□□□□□ -1.61
RPS3AP61247 AC092709.1-201ENST00000521355 1045 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.02□□□□□ -1.61
RPS3AP61247 HMGB1P1-201ENST00000522557 636 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.02□□□□□ -1.61
RPS3AP61247 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.02□□□□□ -1.61
RPS3AP61247 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.02□□□□□ -1.61
RPS3AP61247 AC027369.5-201ENST00000533838 755 ntBASIC5.02□□□□□ -1.61
RPS3AP61247 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RPS3AP61247 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.02□□□□□ -1.61
RPS3AP61247 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms