Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 BNIP3P40-201ENST00000596017 556 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AC095055.1-201ENST00000603472 1113 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AC026979.4-201ENST00000606555 645 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AL355816.2-201ENST00000610049 647 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AC108359.1-201ENST00000616451 1211 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 FRG1DP-201ENST00000635586 771 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 TRIM51GP-201ENST00000534741 1350 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.38□□□□□ -1.55
HDAC4P56524 CASC19-204ENST00000641001 2055 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
HDAC4P56524 AC104623.2-202ENST00000623477 4002 ntBASIC5.38□□□□□ -1.55
HDAC4P56524 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HDAC4P56524 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
HDAC4P56524 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.37□□□□□ -1.55
HDAC4P56524 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HDAC4P56524 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HDAC4P56524 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.37□□□□□ -1.55
HDAC4P56524 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HDAC4P56524 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 SNORA17.1-201ENST00000362945 126 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HDAC4P56524 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HDAC4P56524 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HDAC4P56524 Y_RNA.625-201ENST00000411256 107 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.37□□□□□ -1.55
HDAC4P56524 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.37□□□□□ -1.55
HDAC4P56524 MRPL50P1-201ENST00000431951 384 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.37□□□□□ -1.55
HDAC4P56524 CNOT7P2-201ENST00000441051 832 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.37□□□□□ -1.55
HDAC4P56524 AC022431.1-201ENST00000450941 438 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.37□□□□□ -1.55
HDAC4P56524 RN7SL172P-201ENST00000460535 303 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 RN7SL222P-201ENST00000476452 299 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.37□□□□□ -1.55
HDAC4P56524 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.37□□□□□ -1.55
HDAC4P56524 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.37□□□□□ -1.55
HDAC4P56524 SOX5P1-201ENST00000524155 1127 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HDAC4P56524 CBX3P2-202ENST00000583365 535 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
HDAC4P56524 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.37□□□□□ -1.55
HDAC4P56524 AC116651.1-201ENST00000609724 556 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 RPSAP73-201ENST00000614820 330 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 AL121890.2-201ENST00000617644 465 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
HDAC4P56524 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 AC023510.2-201ENST00000622162 746 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 AL138955.1-201ENST00000622881 1040 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 SAMMSON-227ENST00000642114 1199 ntBASIC5.37□□□□□ -1.55
HDAC4P56524 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HDAC4P56524 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HDAC4P56524 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HDAC4P56524 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HDAC4P56524 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HDAC4P56524 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HDAC4P56524 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HDAC4P56524 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HDAC4P56524 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 AL390316.1-201ENST00000406279 553 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AC211486.3-201ENST00000412694 621 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AP000534.2-201ENST00000412729 568 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.36□□□□□ -1.55
HDAC4P56524 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.36□□□□□ -1.55
HDAC4P56524 AL358176.3-201ENST00000420757 454 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.36□□□□□ -1.55
HDAC4P56524 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HDAC4P56524 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.36□□□□□ -1.55
HDAC4P56524 AL035551.1-201ENST00000446931 348 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AL389915.2-201ENST00000454576 441 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AC079841.1-201ENST00000481228 950 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 AC116562.1-201ENST00000485355 781 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 NIFKP7-201ENST00000503365 834 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 OR5M14P-201ENST00000506803 618 ntBASIC5.36□□□□□ -1.55
HDAC4P56524 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.36□□□□□ -1.55
HDAC4P56524 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.36□□□□□ -1.55
HDAC4P56524 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.36□□□□□ -1.55
HDAC4P56524 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.36□□□□□ -1.55
HDAC4P56524 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.36□□□□□ -1.55
HDAC4P56524 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.36□□□□□ -1.55
HDAC4P56524 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.36□□□□□ -1.55
HDAC4P56524 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms