Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.56□□□□□ -1.68
PKNOX1P55347 EEF1B2P5-201ENST00000444820 548 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.56□□□□□ -1.68
PKNOX1P55347 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.56□□□□□ -1.68
PKNOX1P55347 ATP5G1P3-201ENST00000463301 410 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AC090142.1-201ENST00000465776 462 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 RN7SL727P-201ENST00000482164 296 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AC108022.1-201ENST00000493466 478 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.56□□□□□ -1.68
PKNOX1P55347 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.56□□□□□ -1.68
PKNOX1P55347 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.56□□□□□ -1.68
PKNOX1P55347 STMN1P2-201ENST00000508435 439 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AC091868.1-201ENST00000508746 304 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.56□□□□□ -1.68
PKNOX1P55347 RNA5SP34-201ENST00000516887 130 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.56□□□□□ -1.68
PKNOX1P55347 MORF4L1P3-201ENST00000525966 950 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AC005000.1-201ENST00000536192 288 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PKNOX1P55347 AC087763.1-201ENST00000603391 286 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.56□□□□□ -1.68
PKNOX1P55347 AC087283.1-201ENST00000604029 1074 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AC073137.1-201ENST00000605636 634 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 OR7A19P-201ENST00000608051 733 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AP003499.2-201ENST00000624100 483 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PKNOX1P55347 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.55□□□□□ -1.68
PKNOX1P55347 AL355852.1-201ENST00000454081 1771 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PKNOX1P55347 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
PKNOX1P55347 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PKNOX1P55347 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PKNOX1P55347 RNU1-82P-201ENST00000390851 165 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PKNOX1P55347 AL589647.1-201ENST00000402485 466 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 DPPA2P3-201ENST00000411853 655 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.55□□□□□ -1.68
PKNOX1P55347 AC079168.2-201ENST00000453977 416 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.55□□□□□ -1.68
PKNOX1P55347 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.55□□□□□ -1.68
PKNOX1P55347 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PKNOX1P55347 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PKNOX1P55347 AK4P6-201ENST00000505168 528 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.55□□□□□ -1.68
PKNOX1P55347 AF186190.1-201ENST00000517470 480 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 GCSHP4-201ENST00000538792 439 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.55□□□□□ -1.68
PKNOX1P55347 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.55□□□□□ -1.68
PKNOX1P55347 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.55□□□□□ -1.68
PKNOX1P55347 CD24P2-201ENST00000565486 219 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 SLC25A36P1-201ENST00000590111 465 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.55□□□□□ -1.68
PKNOX1P55347 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.55□□□□□ -1.68
PKNOX1P55347 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.55□□□□□ -1.68
PKNOX1P55347 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PKNOX1P55347 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PKNOX1P55347 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
PKNOX1P55347 AL442639.1-201ENST00000625030 1899 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.55□□□□□ -1.68
PKNOX1P55347 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PKNOX1P55347 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PKNOX1P55347 DDX18P3-201ENST00000404856 2007 ntBASIC4.55□□□□□ -1.68
PKNOX1P55347 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.55□□□□□ -1.68
PKNOX1P55347 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 OR14L1P-202ENST00000641545 3009 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 MAPK10-263ENST00000641052 4307 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.54□□□□□ -1.68
PKNOX1P55347 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.54□□□□□ -1.68
PKNOX1P55347 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PKNOX1P55347 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC104297.1-201ENST00000393779 870 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 OR51B3P-201ENST00000412287 913 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.54□□□□□ -1.68
PKNOX1P55347 AL591848.1-201ENST00000413092 322 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 RPL21P43-201ENST00000425440 472 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.54□□□□□ -1.68
PKNOX1P55347 MTND6P18-201ENST00000439477 513 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 H2AFZP5-201ENST00000446960 382 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 TRY2P-201ENST00000448860 689 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 RPS26P39-201ENST00000469206 341 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 AC022336.1-201ENST00000475510 337 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 RN7SL41P-201ENST00000476144 297 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PKNOX1P55347 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.54□□□□□ -1.68
PKNOX1P55347 OR10G5P-201ENST00000532733 358 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC107918.3-201ENST00000533272 382 ntBASIC4.54□□□□□ -1.68
PKNOX1P55347 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.54□□□□□ -1.68
PKNOX1P55347 AC011487.3-201ENST00000593607 453 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms