Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 RNA5SP27-201ENST00000363839 119 ntBASIC4.87□□□□□ -1.63
CDH12P55289 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CDH12P55289 HSPA8P15-201ENST00000401676 786 ntBASIC4.87□□□□□ -1.63
CDH12P55289 RPS27AP11-201ENST00000402798 447 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AL133388.1-201ENST00000404509 287 ntBASIC4.87□□□□□ -1.63
CDH12P55289 RN7SKP16-201ENST00000410180 299 ntBASIC4.87□□□□□ -1.63
CDH12P55289 RNU4-22P-201ENST00000411058 166 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH12P55289 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH12P55289 KRR1P1-201ENST00000419430 803 ntBASIC4.87□□□□□ -1.63
CDH12P55289 OR2X1P-201ENST00000421144 687 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH12P55289 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH12P55289 MTND6P12-201ENST00000428247 522 ntBASIC4.87□□□□□ -1.63
CDH12P55289 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH12P55289 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH12P55289 YWHAZP2-201ENST00000440317 728 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AL390119.1-201ENST00000440329 312 ntBASIC4.87□□□□□ -1.63
CDH12P55289 CR769776.1-201ENST00000441254 787 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH12P55289 OR51B8P-201ENST00000449892 769 ntBASIC4.87□□□□□ -1.63
CDH12P55289 ZNF886P-201ENST00000450781 723 ntBASIC4.87□□□□□ -1.63
CDH12P55289 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH12P55289 AC119751.5-201ENST00000514077 770 ntBASIC4.87□□□□□ -1.63
CDH12P55289 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH12P55289 RNU6-1004P-201ENST00000516584 111 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.87□□□□□ -1.63
CDH12P55289 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH12P55289 OR5AK3P-201ENST00000527486 1297 ntBASIC4.87□□□□□ -1.63
CDH12P55289 NDUFS5P6-201ENST00000529136 295 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH12P55289 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH12P55289 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.87□□□□□ -1.63
CDH12P55289 OR4U1P-201ENST00000554958 912 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH12P55289 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH12P55289 AC015720.2-201ENST00000567709 334 ntBASIC4.87□□□□□ -1.63
CDH12P55289 MIR1273E-201ENST00000581165 102 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.87□□□□□ -1.63
CDH12P55289 AL049844.2-201ENST00000604280 628 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AC002487.1-201ENST00000604565 994 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AC097065.2-201ENST00000608159 533 ntBASIC4.87□□□□□ -1.63
CDH12P55289 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 AC022079.1-201ENST00000621546 602 ntBASIC4.87□□□□□ -1.63
CDH12P55289 AC024023.1-201ENST00000624530 922 ntBASIC4.87□□□□□ -1.63
CDH12P55289 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH12P55289 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CDH12P55289 AC099786.3-201ENST00000565735 1410 ntBASIC4.87□□□□□ -1.63
CDH12P55289 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH12P55289 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH12P55289 AL603750.1-201ENST00000624216 1717 ntBASIC4.86□□□□□ -1.63
CDH12P55289 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH12P55289 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH12P55289 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 RNU6-236P-201ENST00000363886 106 ntBASIC4.86□□□□□ -1.63
CDH12P55289 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDH12P55289 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH12P55289 MTND4P13-201ENST00000402078 1023 ntBASIC4.86□□□□□ -1.63
CDH12P55289 OR4K12P-201ENST00000406538 961 ntBASIC4.86□□□□□ -1.63
CDH12P55289 SDHDP6-201ENST00000414693 480 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AC234781.4-201ENST00000419384 244 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 RPS4XP16-201ENST00000427198 791 ntBASIC4.86□□□□□ -1.63
CDH12P55289 PTGES3P1-201ENST00000439531 483 ntBASIC4.86□□□□□ -1.63
CDH12P55289 HMGN1P36-201ENST00000446623 298 ntBASIC4.86□□□□□ -1.63
CDH12P55289 GAPDHP25-201ENST00000447061 1001 ntBASIC4.86□□□□□ -1.63
CDH12P55289 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH12P55289 DNAJB5P1-201ENST00000454004 806 ntBASIC4.86□□□□□ -1.63
CDH12P55289 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH12P55289 AC079168.1-201ENST00000458741 345 ntBASIC4.86□□□□□ -1.63
CDH12P55289 NAP1L1P3-201ENST00000462291 880 ntBASIC4.86□□□□□ -1.63
CDH12P55289 RN7SL189P-201ENST00000468631 289 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AC023424.1-201ENST00000496058 459 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AC090638.1-201ENST00000498296 909 ntBASIC4.86□□□□□ -1.63
CDH12P55289 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH12P55289 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.86□□□□□ -1.63
CDH12P55289 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH12P55289 RNA5SP303-201ENST00000516192 130 ntBASIC4.86□□□□□ -1.63
CDH12P55289 FTH1P11-201ENST00000517577 551 ntBASIC4.86□□□□□ -1.63
CDH12P55289 TMEM97P2-201ENST00000517841 403 ntBASIC4.86□□□□□ -1.63
CDH12P55289 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.86□□□□□ -1.63
CDH12P55289 AP006245.2-201ENST00000522004 300 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms