Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS2P54868 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HMGCS2P54868 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS2P54868 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.29□□□□□ -1.56
HMGCS2P54868 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC083837.1-201ENST00000565297 2994 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC125257.1-201ENST00000560400 2930 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS2P54868 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS2P54868 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC004938.1-201ENST00000438468 308 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 ACTR3P2-201ENST00000439585 1257 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 ISCUP1-201ENST00000454451 448 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 AC021660.1-201ENST00000465006 554 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC105137.1-201ENST00000484355 562 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 SNORA70.11-201ENST00000515987 138 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 SNORA70.13-201ENST00000516116 138 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC025884.1-201ENST00000556034 378 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.29□□□□□ -1.56
HMGCS2P54868 AC020634.1-201ENST00000608701 549 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS2P54868 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS2P54868 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS2P54868 AL445487.1-201ENST00000415694 1580 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HMGCS2P54868 ADAM5-202ENST00000399789 1942 ntBASIC5.29□□□□□ -1.56
HMGCS2P54868 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS2P54868 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGCS2P54868 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS2P54868 RPL23AP26-201ENST00000412728 464 ntBASIC5.28□□□□□ -1.56
HMGCS2P54868 SNRPFP1-201ENST00000414761 252 ntBASIC5.28□□□□□ -1.56
HMGCS2P54868 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGCS2P54868 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS2P54868 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.28□□□□□ -1.56
HMGCS2P54868 CDC27P1-201ENST00000445384 715 ntBASIC5.28□□□□□ -1.56
HMGCS2P54868 AC091167.1-201ENST00000492017 396 ntBASIC5.28□□□□□ -1.56
HMGCS2P54868 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.28□□□□□ -1.56
HMGCS2P54868 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS2P54868 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.28□□□□□ -1.56
HMGCS2P54868 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS2P54868 CYCSP40-201ENST00000575927 294 ntBASIC5.28□□□□□ -1.56
HMGCS2P54868 AC015804.1-201ENST00000622935 435 ntBASIC5.28□□□□□ -1.56
HMGCS2P54868 AP003072.5-201ENST00000623872 773 ntBASIC5.28□□□□□ -1.56
HMGCS2P54868 OR2L1P-202ENST00000641567 1023 ntBASIC5.28□□□□□ -1.56
HMGCS2P54868 AL034370.1-201ENST00000397254 1590 ntBASIC5.28□□□□□ -1.56
HMGCS2P54868 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.28□□□□□ -1.56
HMGCS2P54868 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS2P54868 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HMGCS2P54868 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS2P54868 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGCS2P54868 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGCS2P54868 AC007738.1-201ENST00000413892 348 ntBASIC5.27□□□□□ -1.57
HMGCS2P54868 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS2P54868 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGCS2P54868 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS2P54868 AL354766.1-201ENST00000423396 542 ntBASIC5.27□□□□□ -1.57
HMGCS2P54868 AL136231.1-201ENST00000429407 730 ntBASIC5.27□□□□□ -1.57
HMGCS2P54868 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS2P54868 UQCRHP4-201ENST00000471686 272 ntBASIC5.27□□□□□ -1.57
HMGCS2P54868 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS2P54868 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS2P54868 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS2P54868 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.27□□□□□ -1.57
HMGCS2P54868 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGCS2P54868 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.27□□□□□ -1.57
HMGCS2P54868 RNA5SP439-201ENST00000617595 124 ntBASIC5.27□□□□□ -1.57
HMGCS2P54868 AL023881.1-201ENST00000621088 301 ntBASIC5.27□□□□□ -1.57
HMGCS2P54868 AC109446.4-201ENST00000623235 2755 ntBASIC5.27□□□□□ -1.57
HMGCS2P54868 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.27□□□□□ -1.57
HMGCS2P54868 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HMGCS2P54868 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HMGCS2P54868 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS2P54868 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
HMGCS2P54868 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HMGCS2P54868 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.27□□□□□ -1.57
HMGCS2P54868 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HMGCS2P54868 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS2P54868 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HMGCS2P54868 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.26□□□□□ -1.57
HMGCS2P54868 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGCS2P54868 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS2P54868 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS2P54868 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGCS2P54868 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HMGCS2P54868 AC008549.2-201ENST00000333482 706 ntBASIC5.26□□□□□ -1.57
HMGCS2P54868 RPS26P8-201ENST00000393490 348 ntBASIC5.26□□□□□ -1.57
HMGCS2P54868 AC114755.5-201ENST00000447760 831 ntBASIC5.26□□□□□ -1.57
HMGCS2P54868 AL935212.3-201ENST00000450729 284 ntBASIC5.26□□□□□ -1.57
HMGCS2P54868 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.26□□□□□ -1.57
HMGCS2P54868 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.26□□□□□ -1.57
HMGCS2P54868 AC091917.2-201ENST00000505002 744 ntBASIC5.26□□□□□ -1.57
HMGCS2P54868 HNRNPRP2-201ENST00000528421 743 ntBASIC5.26□□□□□ -1.57
HMGCS2P54868 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms