Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNU6-233P-201ENST00000410845 141 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 OR51B3P-201ENST00000412287 913 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL12P48061 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.63□□□□□ -1.67
CXCL12P48061 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.63□□□□□ -1.67
CXCL12P48061 AC034236.1-201ENST00000469891 373 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 AC022034.3-201ENST00000471393 478 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 NPM1P28-201ENST00000492269 840 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 AC023424.1-201ENST00000496058 459 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.63□□□□□ -1.67
CXCL12P48061 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 OR8R1P-201ENST00000543943 764 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.63□□□□□ -1.67
CXCL12P48061 MIR4429-201ENST00000580105 73 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 RN7SL176P-201ENST00000580352 264 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 Z95327.3-201ENST00000610385 572 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 AC006453.5-201ENST00000636451 619 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL12P48061 PROS2P-201ENST00000474651 1951 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 AC022417.1-201ENST00000624768 1303 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL12P48061 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.62□□□□□ -1.67
CXCL12P48061 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL12P48061 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CXCL12P48061 STX3-208ENST00000641815 3236 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL12P48061 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL12P48061 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.62□□□□□ -1.67
CXCL12P48061 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL12P48061 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CXCL12P48061 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CXCL12P48061 RN7SKP280-201ENST00000364196 304 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 MIR659-201ENST00000384963 97 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.62□□□□□ -1.67
CXCL12P48061 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.62□□□□□ -1.67
CXCL12P48061 AC009506.2-201ENST00000420635 840 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.62□□□□□ -1.67
CXCL12P48061 RPS3AP54-201ENST00000435535 734 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 RPL23AP93-201ENST00000440847 484 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 HSFY6P-201ENST00000445573 403 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.62□□□□□ -1.67
CXCL12P48061 AC114982.2-201ENST00000461396 358 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 RPS27AP16-201ENST00000492222 470 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.62□□□□□ -1.67
CXCL12P48061 AC098799.3-201ENST00000506095 438 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
CXCL12P48061 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL12P48061 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.62□□□□□ -1.67
CXCL12P48061 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.62□□□□□ -1.67
CXCL12P48061 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.62□□□□□ -1.67
CXCL12P48061 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL12P48061 AC090017.1-201ENST00000548612 1779 ntBASIC4.62□□□□□ -1.67
CXCL12P48061 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.62□□□□□ -1.67
CXCL12P48061 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL12P48061 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXCL12P48061 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CXCL12P48061 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.62□□□□□ -1.67
CXCL12P48061 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CXCL12P48061 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CXCL12P48061 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CXCL12P48061 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CXCL12P48061 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CXCL12P48061 AP005432.1-201ENST00000580891 3485 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.61□□□□□ -1.67
CXCL12P48061 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.61□□□□□ -1.67
CXCL12P48061 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.61□□□□□ -1.67
CXCL12P48061 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.61□□□□□ -1.67
CXCL12P48061 MIR133A2-201ENST00000347538 102 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.61□□□□□ -1.67
CXCL12P48061 AL022722.2-201ENST00000402519 180 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 RNA5SP317-201ENST00000410176 116 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 RNU6-628P-201ENST00000410675 107 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 RNA5SP311-201ENST00000411290 116 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 LINC01881-201ENST00000416103 412 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.61□□□□□ -1.67
CXCL12P48061 NPM1P18-201ENST00000434232 732 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.61□□□□□ -1.67
CXCL12P48061 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.61□□□□□ -1.67
CXCL12P48061 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CXCL12P48061 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.61□□□□□ -1.67
CXCL12P48061 NIFKP7-201ENST00000503365 834 ntBASIC4.61□□□□□ -1.67
CXCL12P48061 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.61□□□□□ -1.67
CXCL12P48061 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms