Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC013244.3-201ENST00000605614 388 ntBASIC4.32□□□□□ -1.72
NKX2-1P43699 AL031601.1-201ENST00000605702 394 ntBASIC4.32□□□□□ -1.72
NKX2-1P43699 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.32□□□□□ -1.72
NKX2-1P43699 AC116447.1-201ENST00000613153 453 ntBASIC4.32□□□□□ -1.72
NKX2-1P43699 AC015914.2-201ENST00000618167 288 ntBASIC4.32□□□□□ -1.72
NKX2-1P43699 U6.48-201ENST00000618523 106 ntBASIC4.32□□□□□ -1.72
NKX2-1P43699 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX2-1P43699 U6.107-201ENST00000637108 79 ntBASIC4.32□□□□□ -1.72
NKX2-1P43699 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NKX2-1P43699 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NKX2-1P43699 LINC01355-201ENST00000566551 5444 ntBASIC4.32□□□□□ -1.72
NKX2-1P43699 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-1P43699 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-1P43699 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX2-1P43699 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NKX2-1P43699 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NKX2-1P43699 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 RNU5B-4P-201ENST00000363508 111 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NKX2-1P43699 SUGT1P2-201ENST00000379452 992 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 MIR589-201ENST00000385238 99 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AL035419.1-201ENST00000397037 564 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 DNAJC19P6-201ENST00000401853 280 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 NCSTNP1-201ENST00000406229 144 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 HMGB3P18-201ENST00000406327 590 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 AL035660.1-201ENST00000422041 222 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-1P43699 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NKX2-1P43699 RPL35AP21-201ENST00000437667 333 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 HSFY3P-201ENST00000444242 1191 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-1P43699 MRPL35P2-201ENST00000448009 511 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-1P43699 Z95152.1-201ENST00000453556 656 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AP002884.1-201ENST00000479691 655 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 RN7SL170P-201ENST00000487098 295 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 HMGB1P38-201ENST00000490557 577 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-1P43699 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AC090638.1-201ENST00000498296 909 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 PRELID3BP6-201ENST00000503839 571 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 UBE2V1P12-201ENST00000503954 474 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NKX2-1P43699 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-1P43699 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-1P43699 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AC107958.1-201ENST00000556576 290 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-1P43699 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AC069431.2-201ENST00000604149 1099 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AC011626.1-201ENST00000604710 562 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AC018695.5-201ENST00000605872 315 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 OR7A19P-201ENST00000608051 733 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 CYCSP41-201ENST00000616920 296 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AL121890.3-201ENST00000618494 516 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AP001962.1-201ENST00000624114 559 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 AC015726.3-201ENST00000624501 418 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NKX2-1P43699 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-1P43699 AC104260.2-201ENST00000623551 3497 ntBASIC4.31□□□□□ -1.72
NKX2-1P43699 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
NKX2-1P43699 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-1P43699 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-1P43699 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NKX2-1P43699 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AL451142.2-201ENST00000429076 2090 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 NSRP1P1-201ENST00000444067 1693 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 LINC01963-201ENST00000562038 3148 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NKX2-1P43699 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NKX2-1P43699 AC005294.1-201ENST00000355509 281 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 RNA5SP131-201ENST00000365452 119 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 VN1R12P-201ENST00000403778 876 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 RN7SKP16-201ENST00000410180 299 ntBASIC4.3□□□□□ -1.72
NKX2-1P43699 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-1P43699 OR6C64P-201ENST00000419708 825 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms