Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HADHAP40939 AC010385.1-201ENST00000412374 256 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC211486.3-201ENST00000412694 621 ntBASIC5.24□□□□□ -1.57
HADHAP40939 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.24□□□□□ -1.57
HADHAP40939 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.24□□□□□ -1.57
HADHAP40939 LINC01347-201ENST00000417964 355 ntBASIC5.24□□□□□ -1.57
HADHAP40939 PNRC2P1-201ENST00000423940 420 ntBASIC5.24□□□□□ -1.57
HADHAP40939 VN1R42P-201ENST00000424651 344 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC108075.1-201ENST00000424692 529 ntBASIC5.24□□□□□ -1.57
HADHAP40939 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.24□□□□□ -1.57
HADHAP40939 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.24□□□□□ -1.57
HADHAP40939 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.24□□□□□ -1.57
HADHAP40939 RPS26P47-201ENST00000427219 348 ntBASIC5.24□□□□□ -1.57
HADHAP40939 GTF3AP5-201ENST00000442645 697 ntBASIC5.24□□□□□ -1.57
HADHAP40939 CYCSP42-201ENST00000450823 238 ntBASIC5.24□□□□□ -1.57
HADHAP40939 Z92846.1-201ENST00000456203 268 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.24□□□□□ -1.57
HADHAP40939 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.24□□□□□ -1.57
HADHAP40939 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.24□□□□□ -1.57
HADHAP40939 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.24□□□□□ -1.57
HADHAP40939 AC024558.1-201ENST00000505008 528 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC016550.1-201ENST00000505348 785 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC006499.3-201ENST00000506077 748 ntBASIC5.24□□□□□ -1.57
HADHAP40939 GTF2F2P1-201ENST00000511083 675 ntBASIC5.24□□□□□ -1.57
HADHAP40939 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.24□□□□□ -1.57
HADHAP40939 IGKV2D-10-201ENST00000520194 281 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.24□□□□□ -1.57
HADHAP40939 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 OR8A2P-201ENST00000528631 952 ntBASIC5.24□□□□□ -1.57
HADHAP40939 OR10G5P-201ENST00000532733 358 ntBASIC5.24□□□□□ -1.57
HADHAP40939 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.24□□□□□ -1.57
HADHAP40939 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.24□□□□□ -1.57
HADHAP40939 AC015911.5-201ENST00000587076 451 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.24□□□□□ -1.57
HADHAP40939 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HADHAP40939 AC005776.1-201ENST00000603164 290 ntBASIC5.24□□□□□ -1.57
HADHAP40939 MTATP6P2-201ENST00000603319 678 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC123786.2-201ENST00000603459 275 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC008814.1-201ENST00000603797 406 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC005014.3-201ENST00000605985 190 ntBASIC5.24□□□□□ -1.57
HADHAP40939 MIR7973-1-201ENST00000614683 76 ntBASIC5.24□□□□□ -1.57
HADHAP40939 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.24□□□□□ -1.57
HADHAP40939 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.24□□□□□ -1.57
HADHAP40939 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.24□□□□□ -1.57
HADHAP40939 CYP4F35P-202ENST00000636121 390 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AC083865.1-201ENST00000636634 831 ntBASIC5.24□□□□□ -1.57
HADHAP40939 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 AC096656.1-201ENST00000623826 1364 ntBASIC5.24□□□□□ -1.57
HADHAP40939 DDX18P3-201ENST00000404856 2007 ntBASIC5.24□□□□□ -1.57
HADHAP40939 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 SCARNA15-201ENST00000607520 4325 ntBASIC5.24□□□□□ -1.57
HADHAP40939 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HADHAP40939 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.24□□□□□ -1.57
HADHAP40939 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HADHAP40939 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HADHAP40939 PABPC1P6-201ENST00000445594 1829 ntBASIC5.23□□□□□ -1.57
HADHAP40939 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HADHAP40939 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HADHAP40939 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HADHAP40939 RPL6P29-201ENST00000414863 865 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AL158050.1-201ENST00000416077 457 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.23□□□□□ -1.57
HADHAP40939 AC092570.3-201ENST00000420113 693 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.23□□□□□ -1.57
HADHAP40939 RPS29P10-201ENST00000439197 166 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AL450263.2-201ENST00000439400 589 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AC012512.1-201ENST00000446594 718 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HADHAP40939 RN7SL172P-201ENST00000460535 303 ntBASIC5.23□□□□□ -1.57
HADHAP40939 RPS21P4-201ENST00000487122 248 ntBASIC5.23□□□□□ -1.57
HADHAP40939 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.23□□□□□ -1.57
HADHAP40939 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.23□□□□□ -1.57
HADHAP40939 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.23□□□□□ -1.57
HADHAP40939 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.23□□□□□ -1.57
HADHAP40939 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.23□□□□□ -1.57
HADHAP40939 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.23□□□□□ -1.57
HADHAP40939 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HADHAP40939 AC104229.1-201ENST00000561364 255 ntBASIC5.23□□□□□ -1.57
HADHAP40939 TMF1P1-201ENST00000576058 373 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.23□□□□□ -1.57
HADHAP40939 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HADHAP40939 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.23□□□□□ -1.57
HADHAP40939 AC016542.1-201ENST00000608259 493 ntBASIC5.23□□□□□ -1.57
HADHAP40939 MIR8084-201ENST00000614105 89 ntBASIC5.23□□□□□ -1.57
HADHAP40939 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AC118658.2-201ENST00000618697 459 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AC090527.3-201ENST00000619041 548 ntBASIC5.23□□□□□ -1.57
HADHAP40939 AC020978.9-201ENST00000624380 1141 ntBASIC5.23□□□□□ -1.57
HADHAP40939 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.23□□□□□ -1.57
HADHAP40939 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
HADHAP40939 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.23□□□□□ -1.57
HADHAP40939 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.23□□□□□ -1.57
HADHAP40939 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms