Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN6P29350 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN6P29350 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN6P29350 AC093162.1-201ENST00000419682 124 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 YY1P1-201ENST00000427625 668 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 MTCO3P21-201ENST00000430791 643 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 AC007563.3-201ENST00000433233 371 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 RPL12P46-201ENST00000436610 195 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 ELOCP10-201ENST00000440624 327 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 CCDC75P1-201ENST00000469247 791 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN6P29350 HMGB1P47-201ENST00000511281 589 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 AC004980.4-201ENST00000513375 203 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 MTCYBP19-201ENST00000517463 1124 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.68□□□□□ -1.66
PTPN6P29350 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN6P29350 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN6P29350 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN6P29350 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.68□□□□□ -1.66
PTPN6P29350 AC068714.1-201ENST00000559623 800 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN6P29350 AC105254.2-201ENST00000603636 436 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 ELOCP34-201ENST00000604436 327 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 IMMP1LP1-201ENST00000605170 488 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 AC005021.1-201ENST00000608730 355 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 AC104820.1-201ENST00000624183 307 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 CASC19-206ENST00000641028 1430 ntBASIC4.68□□□□□ -1.66
PTPN6P29350 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTPN6P29350 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTPN6P29350 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTPN6P29350 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN6P29350 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN6P29350 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.68□□□□□ -1.66
PTPN6P29350 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.68□□□□□ -1.66
PTPN6P29350 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN6P29350 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN6P29350 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN6P29350 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN6P29350 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PTPN6P29350 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
PTPN6P29350 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN6P29350 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN6P29350 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PTPN6P29350 RNU6-304P-201ENST00000364855 107 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 AC019155.1-201ENST00000382242 574 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 SNORA70.10-201ENST00000384515 134 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 SNORA66-201ENST00000384792 133 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 AL078599.1-201ENST00000402075 293 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.67□□□□□ -1.66
PTPN6P29350 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN6P29350 AL445528.1-201ENST00000426330 420 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN6P29350 RPL34P20-201ENST00000442771 351 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN6P29350 RNA5SP103-201ENST00000459503 118 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 RPL5P13-201ENST00000462840 709 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 AP000942.1-201ENST00000463969 747 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 PPIAP21-201ENST00000464473 501 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 RN7SL826P-201ENST00000479724 288 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN6P29350 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN6P29350 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN6P29350 RPS23P1-201ENST00000491662 432 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 AC231760.1-201ENST00000498002 260 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN6P29350 RN7SKP260-201ENST00000516907 149 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PTPN6P29350 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.67□□□□□ -1.66
PTPN6P29350 AC068020.1-201ENST00000594215 661 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 AC130352.1-201ENST00000602979 661 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 BX322635.1-201ENST00000605804 496 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN6P29350 AC131238.1-201ENST00000617135 328 ntBASIC4.67□□□□□ -1.66
PTPN6P29350 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN6P29350 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.67□□□□□ -1.66
PTPN6P29350 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PTPN6P29350 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN6P29350 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.67□□□□□ -1.66
PTPN6P29350 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PTPN6P29350 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN6P29350 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTPN6P29350 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PTPN6P29350 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 ECM1P2-201ENST00000503354 1577 ntBASIC4.66□□□□□ -1.66
PTPN6P29350 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.66□□□□□ -1.66
PTPN6P29350 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTPN6P29350 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PTPN6P29350 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PTPN6P29350 RNU4-4P-201ENST00000364588 130 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms