Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HMGA1P17096 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGA1P17096 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HMGA1P17096 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HMGA1P17096 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGA1P17096 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGA1P17096 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGA1P17096 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
HMGA1P17096 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGA1P17096 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGA1P17096 RNA5SP479-201ENST00000364858 117 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 RN7SKP186-201ENST00000365371 303 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HMGA1P17096 FCF1P5-201ENST00000406490 482 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 RPL23AP26-201ENST00000412728 464 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGA1P17096 RPL21P91-201ENST00000429231 479 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 AC114495.1-201ENST00000441274 436 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGA1P17096 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGA1P17096 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGA1P17096 NPM1P6-201ENST00000521088 871 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGA1P17096 AC025884.1-201ENST00000556034 378 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGA1P17096 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGA1P17096 AC090515.3-201ENST00000560431 315 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.63□□□□□ -1.67
HMGA1P17096 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGA1P17096 AC103792.1-201ENST00000603591 919 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 AC010857.1-201ENST00000606398 594 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 AC138965.3-201ENST00000623875 498 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGA1P17096 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGA1P17096 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGA1P17096 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGA1P17096 AL022322.2-201ENST00000624072 20397 ntBASIC4.63□□□□□ -1.67
HMGA1P17096 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGA1P17096 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGA1P17096 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGA1P17096 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
HMGA1P17096 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGA1P17096 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGA1P17096 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGA1P17096 NXPH1-205ENST00000602349 1953 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGA1P17096 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGA1P17096 RNA5SP515-201ENST00000364570 118 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HMGA1P17096 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGA1P17096 CTSL3P-202ENST00000412179 788 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.62□□□□□ -1.67
HMGA1P17096 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGA1P17096 NFYAP1-201ENST00000431953 972 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGA1P17096 RPL23AP52-201ENST00000439311 478 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 UQCRHP4-201ENST00000471686 272 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGA1P17096 AC105137.1-201ENST00000484355 562 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGA1P17096 MORF4L2P1-201ENST00000503761 858 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGA1P17096 AP003730.1-201ENST00000524605 285 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGA1P17096 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGA1P17096 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGA1P17096 AC021483.2-201ENST00000567415 758 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 AC009852.2-201ENST00000567898 485 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 AC091178.1-203ENST00000584586 279 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGA1P17096 IMMP1LP1-201ENST00000605170 488 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGA1P17096 AP003497.2-201ENST00000624220 967 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 AL139254.3-201ENST00000641097 674 ntBASIC4.62□□□□□ -1.67
HMGA1P17096 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HMGA1P17096 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGA1P17096 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGA1P17096 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGA1P17096 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HMGA1P17096 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HMGA1P17096 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HMGA1P17096 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 MFSD8-242ENST00000641690 4199 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HMGA1P17096 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGA1P17096 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGA1P17096 MIR921-201ENST00000401133 56 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 AMZ2P2-201ENST00000406819 1057 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 NRBF2P2-201ENST00000413087 861 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGA1P17096 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGA1P17096 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms