Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SEC11B-201ENST00000518383 499 ntBASIC4.23□□□□□ -1.73
UBCP0CG48 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.23□□□□□ -1.73
UBCP0CG48 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.23□□□□□ -1.73
UBCP0CG48 DYNLL1P4-201ENST00000549314 266 ntBASIC4.23□□□□□ -1.73
UBCP0CG48 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.23□□□□□ -1.73
UBCP0CG48 HMGB3P26-201ENST00000560051 582 ntBASIC4.23□□□□□ -1.73
UBCP0CG48 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.23□□□□□ -1.73
UBCP0CG48 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.23□□□□□ -1.73
UBCP0CG48 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.23□□□□□ -1.73
UBCP0CG48 AC091979.2-201ENST00000607514 214 ntBASIC4.23□□□□□ -1.73
UBCP0CG48 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.23□□□□□ -1.73
UBCP0CG48 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.23□□□□□ -1.73
UBCP0CG48 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UBCP0CG48 SNX18P1Y-201ENST00000616231 511 ntBASIC4.23□□□□□ -1.73
UBCP0CG48 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.23□□□□□ -1.73
UBCP0CG48 AC087565.3-202ENST00000642085 1603 ntBASIC4.23□□□□□ -1.73
UBCP0CG48 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
UBCP0CG48 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBCP0CG48 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBCP0CG48 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBCP0CG48 AL445487.1-201ENST00000415694 1580 ntBASIC4.23□□□□□ -1.73
UBCP0CG48 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.23□□□□□ -1.73
UBCP0CG48 AC017104.4-201ENST00000636283 1592 ntBASIC4.23□□□□□ -1.73
UBCP0CG48 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.22□□□□□ -1.73
UBCP0CG48 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
UBCP0CG48 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
UBCP0CG48 AL357515.1-201ENST00000402967 542 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 LAP3P1-201ENST00000403648 294 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 MIR1286-201ENST00000408112 78 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 U3.36-201ENST00000408418 213 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 RNA5SP345-201ENST00000410646 108 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 AL590806.1-201ENST00000415818 853 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 PDSS1P1-201ENST00000422953 1114 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 MTCO3P21-201ENST00000430791 643 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 MTCYBP29-201ENST00000436327 1006 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 AC092013.1-201ENST00000438795 332 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 RPL34P20-201ENST00000442771 351 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 BUD31P2-201ENST00000449374 300 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 C1DP3-201ENST00000455013 423 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.22□□□□□ -1.73
UBCP0CG48 SETP20-201ENST00000457046 852 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.22□□□□□ -1.73
UBCP0CG48 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.22□□□□□ -1.73
UBCP0CG48 SNRPCP2-201ENST00000504370 475 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.22□□□□□ -1.73
UBCP0CG48 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.22□□□□□ -1.73
UBCP0CG48 IGKV2-18-201ENST00000522607 343 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.22□□□□□ -1.73
UBCP0CG48 AC068446.3-201ENST00000555285 382 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 AC079075.1-201ENST00000559543 878 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.22□□□□□ -1.73
UBCP0CG48 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.22□□□□□ -1.73
UBCP0CG48 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.22□□□□□ -1.73
UBCP0CG48 BMS1P7-201ENST00000602440 1052 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 AC010424.2-201ENST00000607594 443 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 AC026124.2-201ENST00000621847 656 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBCP0CG48 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
UBCP0CG48 TLK1P1-201ENST00000456760 2440 ntBASIC4.22□□□□□ -1.73
UBCP0CG48 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
UBCP0CG48 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.21□□□□□ -1.73
UBCP0CG48 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UBCP0CG48 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.21□□□□□ -1.74
UBCP0CG48 RN7SKP162-201ENST00000363605 345 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
UBCP0CG48 MIR195-201ENST00000385194 87 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.21□□□□□ -1.74
UBCP0CG48 AF186996.5-201ENST00000418098 904 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 AC006065.1-201ENST00000422539 802 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.21□□□□□ -1.74
UBCP0CG48 AC079807.1-201ENST00000429993 481 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.21□□□□□ -1.74
UBCP0CG48 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.21□□□□□ -1.74
UBCP0CG48 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.21□□□□□ -1.74
UBCP0CG48 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UBCP0CG48 RN7SL319P-201ENST00000480656 221 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 RPL7P51-201ENST00000490532 749 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 MTCO3P42-201ENST00000509488 518 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 AC108471.1-201ENST00000513977 287 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 MTCO3P39-201ENST00000514812 518 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 MYL12AP1-201ENST00000518490 515 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.21□□□□□ -1.74
UBCP0CG48 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.21□□□□□ -1.74
UBCP0CG48 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.21□□□□□ -1.74
UBCP0CG48 AC092490.3-201ENST00000545370 572 ntBASIC4.21□□□□□ -1.74
UBCP0CG48 AC004825.1-201ENST00000555068 586 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms