Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.53□□□□□ -1.84
CXCL1P09341 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL1P09341 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.53□□□□□ -1.84
CXCL1P09341 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CXCL1P09341 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.53□□□□□ -1.84
CXCL1P09341 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CXCL1P09341 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL1P09341 RNA5SP388-201ENST00000362584 119 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL1P09341 MIR143-201ENST00000385300 106 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 OR7E156P-201ENST00000400303 464 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 EIF4A1P3-201ENST00000411521 244 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.53□□□□□ -1.84
CXCL1P09341 GJA6P-201ENST00000415117 1042 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 AC092570.3-201ENST00000420113 693 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL1P09341 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL1P09341 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.53□□□□□ -1.84
CXCL1P09341 RPL36AP39-201ENST00000445859 318 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL1P09341 MTND4LP12-201ENST00000448237 295 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 RN7SL168P-201ENST00000463821 279 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 UBA52P3-201ENST00000491303 382 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 RPL37P23-201ENST00000492641 294 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 RN7SL244P-201ENST00000493405 297 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 PFN1P8-201ENST00000497012 543 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.53□□□□□ -1.84
CXCL1P09341 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.53□□□□□ -1.84
CXCL1P09341 AL139286.1-201ENST00000604465 483 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 AL499605.1-201ENST00000604628 403 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 AC010201.1-201ENST00000605051 540 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 AP002360.3-201ENST00000607673 710 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 AC109309.2-201ENST00000612597 332 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 MIR6071-201ENST00000616741 78 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.53□□□□□ -1.84
CXCL1P09341 LINC02471-203ENST00000641941 4752 ntBASIC3.53□□□□□ -1.84
CXCL1P09341 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL1P09341 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.53□□□□□ -1.84
CXCL1P09341 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL1P09341 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CXCL1P09341 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CXCL1P09341 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.53□□□□□ -1.84
CXCL1P09341 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CXCL1P09341 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CXCL1P09341 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CXCL1P09341 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CXCL1P09341 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 RNF19BPY-201ENST00000458209 1550 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.52□□□□□ -1.85
CXCL1P09341 SAMMSON-226ENST00000642089 1582 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 RNU6-984P-201ENST00000363236 109 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 RNU1-89P-201ENST00000384592 164 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 AL512430.2-201ENST00000406786 339 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 RN7SKP59-201ENST00000410520 314 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 RN7SKP126-201ENST00000411143 300 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL1P09341 TBCAP2-201ENST00000416175 326 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 RPS23P10-201ENST00000416185 486 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 CYP4F29P-201ENST00000420685 446 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 GLUD1P9-201ENST00000420997 1173 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC3.52□□□□□ -1.85
CXCL1P09341 RPS17P8-201ENST00000434525 335 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.52□□□□□ -1.85
CXCL1P09341 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.52□□□□□ -1.85
CXCL1P09341 SPRYD7P1-201ENST00000443861 570 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 AP000281.1-201ENST00000444036 316 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 HMGN1P2-201ENST00000445197 310 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 YWHAEP1-201ENST00000453697 763 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.52□□□□□ -1.85
CXCL1P09341 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.52□□□□□ -1.85
CXCL1P09341 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.52□□□□□ -1.85
CXCL1P09341 AC025554.1-201ENST00000505641 188 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 RNA5SP228-201ENST00000516232 133 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 RNA5SP43-201ENST00000516559 110 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.52□□□□□ -1.85
CXCL1P09341 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.52□□□□□ -1.85
CXCL1P09341 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL1P09341 AC092851.1-201ENST00000535964 478 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.52□□□□□ -1.85
CXCL1P09341 AL049839.1-201ENST00000556151 657 ntBASIC3.52□□□□□ -1.85
CXCL1P09341 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL1P09341 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL1P09341 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.52□□□□□ -1.85
CXCL1P09341 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CXCL1P09341 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms