Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.46□□□□□ -1.54
MMP3P08254 AC005242.1-201ENST00000585658 438 ntBASIC5.46□□□□□ -1.54
MMP3P08254 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.46□□□□□ -1.54
MMP3P08254 AC019193.2-201ENST00000610012 634 ntBASIC5.46□□□□□ -1.54
MMP3P08254 FAM27B-201ENST00000610601 213 ntBASIC5.46□□□□□ -1.54
MMP3P08254 AC015922.4-201ENST00000612568 690 ntBASIC5.46□□□□□ -1.54
MMP3P08254 AC091932.2-201ENST00000623014 291 ntBASIC5.46□□□□□ -1.54
MMP3P08254 AC021106.3-201ENST00000623925 531 ntBASIC5.46□□□□□ -1.54
MMP3P08254 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
MMP3P08254 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
MMP3P08254 AL132640.2-201ENST00000559968 1698 ntBASIC5.46□□□□□ -1.54
MMP3P08254 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
MMP3P08254 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.46□□□□□ -1.54
MMP3P08254 GVINP1-202ENST00000531871 7271 ntBASIC5.46□□□□□ -1.54
MMP3P08254 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
MMP3P08254 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MMP3P08254 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP3P08254 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MMP3P08254 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.45□□□□□ -1.54
MMP3P08254 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP3P08254 AC007618.1-201ENST00000366455 732 ntBASIC5.45□□□□□ -1.54
MMP3P08254 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
MMP3P08254 SNORA11-201ENST00000408789 128 ntBASIC5.45□□□□□ -1.54
MMP3P08254 RNA5SP345-201ENST00000410646 108 ntBASIC5.45□□□□□ -1.54
MMP3P08254 RN7SKP106-201ENST00000410832 272 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.45□□□□□ -1.54
MMP3P08254 RANP4-201ENST00000413361 655 ntBASIC5.45□□□□□ -1.54
MMP3P08254 MTND4LP13-201ENST00000425022 298 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AC007563.3-201ENST00000433233 371 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AC011242.1-201ENST00000433596 1158 ntBASIC5.45□□□□□ -1.54
MMP3P08254 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.45□□□□□ -1.54
MMP3P08254 RPS5P7-201ENST00000456664 608 ntBASIC5.45□□□□□ -1.54
MMP3P08254 STRADBP1-201ENST00000478954 1281 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AC093770.1-201ENST00000511559 571 ntBASIC5.45□□□□□ -1.54
MMP3P08254 OR5M2P-201ENST00000529003 936 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.45□□□□□ -1.54
MMP3P08254 OR8X1P-201ENST00000534542 869 ntBASIC5.45□□□□□ -1.54
MMP3P08254 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.45□□□□□ -1.54
MMP3P08254 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.45□□□□□ -1.54
MMP3P08254 AC233266.2-201ENST00000567067 528 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.45□□□□□ -1.54
MMP3P08254 AC096947.1-201ENST00000603233 470 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AC010424.2-201ENST00000607594 443 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AL645927.2-201ENST00000618350 349 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AL022401.1-201ENST00000619498 108 ntBASIC5.45□□□□□ -1.54
MMP3P08254 AC090506.2-201ENST00000624521 419 ntBASIC5.45□□□□□ -1.54
MMP3P08254 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.45□□□□□ -1.54
MMP3P08254 AC099654.8-201ENST00000637757 681 ntBASIC5.45□□□□□ -1.54
MMP3P08254 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.45□□□□□ -1.54
MMP3P08254 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
MMP3P08254 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP3P08254 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
MMP3P08254 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
MMP3P08254 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
MMP3P08254 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
MMP3P08254 AC004656.1-201ENST00000568479 4951 ntBASIC5.45□□□□□ -1.54
MMP3P08254 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.45□□□□□ -1.54
MMP3P08254 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
MMP3P08254 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.44□□□□□ -1.54
MMP3P08254 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 SNORA73.1-201ENST00000363107 205 ntBASIC5.44□□□□□ -1.54
MMP3P08254 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.44□□□□□ -1.54
MMP3P08254 Z86062.1-201ENST00000406773 777 ntBASIC5.44□□□□□ -1.54
MMP3P08254 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.44□□□□□ -1.54
MMP3P08254 AL645931.1-201ENST00000439737 410 ntBASIC5.44□□□□□ -1.54
MMP3P08254 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.44□□□□□ -1.54
MMP3P08254 CEACAMP6-201ENST00000452007 574 ntBASIC5.44□□□□□ -1.54
MMP3P08254 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.44□□□□□ -1.54
MMP3P08254 RPSAP51-201ENST00000497462 645 ntBASIC5.44□□□□□ -1.54
MMP3P08254 HMGB1P3-201ENST00000502802 616 ntBASIC5.44□□□□□ -1.54
MMP3P08254 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.44□□□□□ -1.54
MMP3P08254 AC016559.2-201ENST00000510759 359 ntBASIC5.44□□□□□ -1.54
MMP3P08254 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.44□□□□□ -1.54
MMP3P08254 AC016550.3-201ENST00000515706 767 ntBASIC5.44□□□□□ -1.54
MMP3P08254 SCARNA1-201ENST00000517138 166 ntBASIC5.44□□□□□ -1.54
MMP3P08254 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.44□□□□□ -1.54
MMP3P08254 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
MMP3P08254 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.44□□□□□ -1.54
MMP3P08254 AC004923.2-201ENST00000529649 369 ntBASIC5.44□□□□□ -1.54
MMP3P08254 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.44□□□□□ -1.54
MMP3P08254 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.44□□□□□ -1.54
MMP3P08254 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.44□□□□□ -1.54
MMP3P08254 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 AC018695.5-201ENST00000605872 315 ntBASIC5.44□□□□□ -1.54
MMP3P08254 MIR1264-201ENST00000616374 69 ntBASIC5.44□□□□□ -1.54
MMP3P08254 AC009704.2-201ENST00000618739 483 ntBASIC5.44□□□□□ -1.54
MMP3P08254 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.44□□□□□ -1.54
MMP3P08254 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.44□□□□□ -1.54
MMP3P08254 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
MMP3P08254 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.44□□□□□ -1.54
MMP3P08254 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms