Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF40O75150 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RNF40O75150 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RNF40O75150 RNA5SP218-201ENST00000363188 109 ntBASIC7.85□□□□□ -1.15
RNF40O75150 Y_RNA.176-201ENST00000363815 109 ntBASIC7.85□□□□□ -1.15
RNF40O75150 RNA5SP302-201ENST00000364896 100 ntBASIC7.85□□□□□ -1.15
RNF40O75150 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
RNF40O75150 AC092642.1-201ENST00000392417 425 ntBASIC7.85□□□□□ -1.15
RNF40O75150 ZNF37CP-201ENST00000406795 241 ntBASIC7.85□□□□□ -1.15
RNF40O75150 GSTA10P-201ENST00000412182 576 ntBASIC7.85□□□□□ -1.15
RNF40O75150 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.85□□□□□ -1.15
RNF40O75150 SLC35E1P1-201ENST00000419313 864 ntBASIC7.85□□□□□ -1.15
RNF40O75150 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.85□□□□□ -1.15
RNF40O75150 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF40O75150 AC002504.1-201ENST00000438281 691 ntBASIC7.85□□□□□ -1.15
RNF40O75150 BNIP3P2-201ENST00000441221 577 ntBASIC7.85□□□□□ -1.15
RNF40O75150 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC7.85□□□□□ -1.15
RNF40O75150 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF40O75150 AL136380.1-201ENST00000447970 162 ntBASIC7.85□□□□□ -1.15
RNF40O75150 HMGB3P22-202ENST00000451823 572 ntBASIC7.85□□□□□ -1.15
RNF40O75150 AL645937.3-201ENST00000453647 936 ntBASIC7.85□□□□□ -1.15
RNF40O75150 MRPS21P1-201ENST00000453850 223 ntBASIC7.85□□□□□ -1.15
RNF40O75150 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.85□□□□□ -1.15
RNF40O75150 AC017015.1-201ENST00000477387 286 ntBASIC7.85□□□□□ -1.15
RNF40O75150 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF40O75150 PSMA2P2-201ENST00000504319 686 ntBASIC7.85□□□□□ -1.15
RNF40O75150 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.85□□□□□ -1.15
RNF40O75150 RNU6-789P-201ENST00000517105 102 ntBASIC7.85□□□□□ -1.15
RNF40O75150 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.85□□□□□ -1.15
RNF40O75150 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.85□□□□□ -1.15
RNF40O75150 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF40O75150 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.85□□□□□ -1.15
RNF40O75150 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.85□□□□□ -1.15
RNF40O75150 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF40O75150 HMGB1P6-201ENST00000569046 646 ntBASIC7.85□□□□□ -1.15
RNF40O75150 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF40O75150 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.85□□□□□ -1.15
RNF40O75150 RPL26P30-202ENST00000602923 645 ntBASIC7.85□□□□□ -1.15
RNF40O75150 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC7.85□□□□□ -1.15
RNF40O75150 AC099494.2-201ENST00000623371 978 ntBASIC7.85□□□□□ -1.15
RNF40O75150 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.85□□□□□ -1.15
RNF40O75150 AC119674.1-212ENST00000641155 993 ntBASIC7.85□□□□□ -1.15
RNF40O75150 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF40O75150 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
RNF40O75150 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.85□□□□□ -1.15
RNF40O75150 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
RNF40O75150 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.85□□□□□ -1.15
RNF40O75150 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RNF40O75150 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RNF40O75150 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC7.85□□□□□ -1.15
RNF40O75150 AC006020.1-201ENST00000420179 1854 ntBASIC7.85□□□□□ -1.15
RNF40O75150 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.85□□□□□ -1.15
RNF40O75150 AL021877.2-201ENST00000624442 10684 ntBASIC7.85□□□□□ -1.15
RNF40O75150 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.85□□□□□ -1.15
RNF40O75150 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RNF40O75150 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
RNF40O75150 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
RNF40O75150 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
RNF40O75150 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.84□□□□□ -1.15
RNF40O75150 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
RNF40O75150 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.84□□□□□ -1.15
RNF40O75150 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
RNF40O75150 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RNF40O75150 RN7SKP211-201ENST00000363328 315 ntBASIC7.84□□□□□ -1.15
RNF40O75150 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RNF40O75150 MIR138-2-201ENST00000384916 84 ntBASIC7.84□□□□□ -1.15
RNF40O75150 RNA5SP23-201ENST00000391006 105 ntBASIC7.84□□□□□ -1.15
RNF40O75150 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RNF40O75150 PTMAP8-201ENST00000397729 342 ntBASIC7.84□□□□□ -1.15
RNF40O75150 RPL7P25-201ENST00000404151 721 ntBASIC7.84□□□□□ -1.15
RNF40O75150 MIR1204-201ENST00000408388 67 ntBASIC7.84□□□□□ -1.15
RNF40O75150 RNU2-8P-201ENST00000410727 190 ntBASIC7.84□□□□□ -1.15
RNF40O75150 AC127537.1-201ENST00000418183 748 ntBASIC7.84□□□□□ -1.15
RNF40O75150 RBMY2QP-201ENST00000429799 1147 ntBASIC7.84□□□□□ -1.15
RNF40O75150 RSU1P2-202ENST00000437884 485 ntBASIC7.84□□□□□ -1.15
RNF40O75150 FABP5P2-201ENST00000439042 408 ntBASIC7.84□□□□□ -1.15
RNF40O75150 FAM103A2P-201ENST00000444122 354 ntBASIC7.84□□□□□ -1.15
RNF40O75150 AL161454.1-201ENST00000446226 569 ntBASIC7.84□□□□□ -1.15
RNF40O75150 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.84□□□□□ -1.15
RNF40O75150 AC007547.1-201ENST00000462177 490 ntBASIC7.84□□□□□ -1.15
RNF40O75150 AC097493.1-201ENST00000463958 372 ntBASIC7.84□□□□□ -1.15
RNF40O75150 RN7SL55P-201ENST00000464534 297 ntBASIC7.84□□□□□ -1.15
RNF40O75150 RPL29P23-201ENST00000486188 442 ntBASIC7.84□□□□□ -1.15
RNF40O75150 RN7SL776P-201ENST00000493390 268 ntBASIC7.84□□□□□ -1.15
RNF40O75150 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.84□□□□□ -1.15
RNF40O75150 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.84□□□□□ -1.15
RNF40O75150 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7.84□□□□□ -1.15
RNF40O75150 AC139272.1-201ENST00000505516 640 ntBASIC7.84□□□□□ -1.15
RNF40O75150 TTC39CP1-201ENST00000512513 755 ntBASIC7.84□□□□□ -1.15
RNF40O75150 AC113352.1-201ENST00000513196 666 ntBASIC7.84□□□□□ -1.15
RNF40O75150 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC7.84□□□□□ -1.15
RNF40O75150 RNU6-150P-201ENST00000516237 95 ntBASIC7.84□□□□□ -1.15
RNF40O75150 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.84□□□□□ -1.15
RNF40O75150 AP000889.1-201ENST00000530968 660 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms