Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN3O15551 AC008676.3-201ENST00000521237 435 ntBASIC5.15□□□□□ -1.59
CLDN3O15551 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN3O15551 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.15□□□□□ -1.59
CLDN3O15551 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.15□□□□□ -1.59
CLDN3O15551 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN3O15551 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.15□□□□□ -1.59
CLDN3O15551 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.15□□□□□ -1.59
CLDN3O15551 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.15□□□□□ -1.59
CLDN3O15551 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.15□□□□□ -1.59
CLDN3O15551 AC073137.1-201ENST00000605636 634 ntBASIC5.15□□□□□ -1.59
CLDN3O15551 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.15□□□□□ -1.59
CLDN3O15551 TMEM30CP-203ENST00000637814 1035 ntBASIC5.15□□□□□ -1.59
CLDN3O15551 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.15□□□□□ -1.59
CLDN3O15551 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN3O15551 A2MP1-204ENST00000566278 4130 ntBASIC5.15□□□□□ -1.59
CLDN3O15551 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN3O15551 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN3O15551 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN3O15551 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN3O15551 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.15□□□□□ -1.59
CLDN3O15551 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CLDN3O15551 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.15□□□□□ -1.59
CLDN3O15551 BTBD10P1-201ENST00000549824 1352 ntBASIC5.15□□□□□ -1.59
CLDN3O15551 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CLDN3O15551 AL359922.3-201ENST00000624779 1670 ntBASIC5.15□□□□□ -1.59
CLDN3O15551 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CLDN3O15551 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN3O15551 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN3O15551 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CLDN3O15551 AL445487.1-201ENST00000415694 1580 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 AC079741.1-201ENST00000321498 212 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 CYB5AP4-201ENST00000396692 399 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 ARL4AP5-201ENST00000404372 599 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 ATG4AP1-201ENST00000416893 538 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 AC019050.1-201ENST00000418508 492 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 AC140479.3-201ENST00000418944 1126 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 AL392003.1-201ENST00000434394 243 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 AC097523.2-201ENST00000435551 652 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN3O15551 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN3O15551 AC073264.2-201ENST00000448886 166 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN3O15551 RPL5P22-201ENST00000480199 884 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.14□□□□□ -1.59
CLDN3O15551 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN3O15551 RNU6-513P-201ENST00000516104 104 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 AP006289.1-201ENST00000538089 277 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN3O15551 AC137768.1-201ENST00000549998 553 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN3O15551 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN3O15551 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.14□□□□□ -1.59
CLDN3O15551 AC104785.1-201ENST00000603220 588 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 MIR8069-1-201ENST00000616627 86 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 MIR8069-2-201ENST00000621412 86 ntBASIC5.14□□□□□ -1.59
CLDN3O15551 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.14□□□□□ -1.59
CLDN3O15551 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLDN3O15551 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLDN3O15551 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN3O15551 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN3O15551 AP000580.1-201ENST00000404439 358 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 RPS16P5-201ENST00000406501 404 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 MIR1271-201ENST00000408537 86 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 RN7SKP106-201ENST00000410832 272 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 OR51B3P-201ENST00000412287 913 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN3O15551 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN3O15551 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN3O15551 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN3O15551 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN3O15551 MRPL48P1-201ENST00000445390 636 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN3O15551 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN3O15551 RNA5SP103-201ENST00000459503 118 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 AL591473.1-201ENST00000464297 313 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 AC090142.1-201ENST00000465776 462 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 RPL12P20-201ENST00000475538 479 ntBASIC5.13□□□□□ -1.59
CLDN3O15551 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.13□□□□□ -1.59
CLDN3O15551 AC020890.1-201ENST00000491837 504 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms