Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXN3O00409 AC008565.1-201ENST00000509046 885 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXN3O00409 EIF3KP3-201ENST00000514461 639 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXN3O00409 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.69□□□□□ -1.5
FOXN3O00409 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXN3O00409 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXN3O00409 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
FOXN3O00409 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXN3O00409 AC095057.3-201ENST00000567102 1157 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC027455.1-201ENST00000574104 594 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 MTCYBP13-201ENST00000578634 1093 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXN3O00409 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXN3O00409 SUGT1P3-202ENST00000604259 383 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AL450336.1-201ENST00000605180 586 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXN3O00409 MIR8080-201ENST00000622224 89 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC104985.3-201ENST00000623479 597 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXN3O00409 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXN3O00409 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXN3O00409 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
FOXN3O00409 AL137100.1-201ENST00000556703 1620 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXN3O00409 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXN3O00409 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
FOXN3O00409 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
FOXN3O00409 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
FOXN3O00409 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXN3O00409 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
FOXN3O00409 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXN3O00409 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 RNU4-44P-201ENST00000363050 141 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXN3O00409 MIR525-201ENST00000384978 85 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 RNU1-77P-201ENST00000390868 162 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXN3O00409 AL390774.1-201ENST00000411924 246 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 RPL12P9-201ENST00000412942 488 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 AL035246.1-201ENST00000433554 1255 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXN3O00409 OR10R1P-201ENST00000441524 1141 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 DNAJB5P1-201ENST00000454004 806 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 RPL7AP52-201ENST00000458096 790 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXN3O00409 AC023141.9-201ENST00000458734 412 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 RPL7P40-201ENST00000481703 745 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 AC079203.1-201ENST00000487972 404 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 RN7SL547P-201ENST00000490793 290 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 AC022133.1-201ENST00000490961 571 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.68□□□□□ -1.5
FOXN3O00409 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXN3O00409 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXN3O00409 RN7SKP265-201ENST00000516448 223 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.68□□□□□ -1.5
FOXN3O00409 AC083923.1-201ENST00000523708 376 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 OR8K4P-201ENST00000534608 872 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.68□□□□□ -1.5
FOXN3O00409 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXN3O00409 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXN3O00409 SULT1C2P2-201ENST00000562517 294 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.68□□□□□ -1.5
FOXN3O00409 AL589674.2-201ENST00000604304 337 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 AC005252.1-201ENST00000604518 1063 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 AC007204.2-201ENST00000615022 616 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 STMN1P1-201ENST00000617809 440 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXN3O00409 AC026124.2-201ENST00000621847 656 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 LINC01808-202ENST00000641680 1116 ntBASIC5.68□□□□□ -1.5
FOXN3O00409 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.68□□□□□ -1.5
FOXN3O00409 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
FOXN3O00409 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.68□□□□□ -1.5
FOXN3O00409 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FOXN3O00409 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXN3O00409 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.67□□□□□ -1.5
FOXN3O00409 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXN3O00409 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
FOXN3O00409 GVINP1-202ENST00000531871 7271 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
FOXN3O00409 AC100871.1-201ENST00000507871 1456 ntBASIC5.67□□□□□ -1.5
FOXN3O00409 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.67□□□□□ -1.5
FOXN3O00409 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
FOXN3O00409 MAPK10-328ENST00000641553 4009 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms