Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.17□□□□□ -1.58
O00370 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.17□□□□□ -1.58
O00370 CASC19-222ENST00000641321 1173 ntBASIC5.17□□□□□ -1.58
O00370 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
O00370 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.17□□□□□ -1.58
O00370 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
O00370 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 UGT2B26P-201ENST00000508672 1613 ntBASIC5.16□□□□□ -1.58
O00370 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
O00370 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
O00370 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
O00370 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
O00370 AC131971.1-201ENST00000332881 1482 ntBASIC5.16□□□□□ -1.58
O00370 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
O00370 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 OR1F12-201ENST00000402365 945 ntBASIC5.16□□□□□ -1.58
O00370 AP000580.1-201ENST00000404439 358 ntBASIC5.16□□□□□ -1.58
O00370 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 GLUD1P9-201ENST00000420997 1173 ntBASIC5.16□□□□□ -1.58
O00370 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.16□□□□□ -1.58
O00370 MTND2P11-201ENST00000423638 648 ntBASIC5.16□□□□□ -1.58
O00370 FABP7P2-201ENST00000429946 379 ntBASIC5.16□□□□□ -1.58
O00370 PA2G4P6-201ENST00000438325 1197 ntBASIC5.16□□□□□ -1.58
O00370 RPL12P3-201ENST00000440080 396 ntBASIC5.16□□□□□ -1.58
O00370 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 SLC25A18P1-201ENST00000449385 454 ntBASIC5.16□□□□□ -1.58
O00370 AC243772.1-201ENST00000451620 410 ntBASIC5.16□□□□□ -1.58
O00370 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 RPL7P16-201ENST00000479738 738 ntBASIC5.16□□□□□ -1.58
O00370 NDUFB5P1-201ENST00000508134 564 ntBASIC5.16□□□□□ -1.58
O00370 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
O00370 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.16□□□□□ -1.58
O00370 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 OR7E10P-201ENST00000526420 991 ntBASIC5.16□□□□□ -1.58
O00370 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
O00370 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.16□□□□□ -1.58
O00370 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
O00370 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
O00370 AC012414.2-201ENST00000559474 187 ntBASIC5.16□□□□□ -1.58
O00370 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.16□□□□□ -1.58
O00370 AC009117.1-201ENST00000563948 554 ntBASIC5.16□□□□□ -1.58
O00370 CYCSP40-201ENST00000575927 294 ntBASIC5.16□□□□□ -1.58
O00370 AC020923.1-201ENST00000624021 917 ntBASIC5.16□□□□□ -1.58
O00370 TMEM30CP-203ENST00000637814 1035 ntBASIC5.16□□□□□ -1.58
O00370 AL596275.2-204ENST00000641628 552 ntBASIC5.16□□□□□ -1.58
O00370 AL596275.2-206ENST00000641957 626 ntBASIC5.16□□□□□ -1.58
O00370 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
O00370 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.16□□□□□ -1.58
O00370 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
O00370 SALL4P2-201ENST00000423288 2910 ntBASIC5.16□□□□□ -1.58
O00370 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
O00370 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
O00370 AC087565.3-202ENST00000642085 1603 ntBASIC5.15□□□□□ -1.58
O00370 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
O00370 AL133268.1-201ENST00000405676 1401 ntBASIC5.15□□□□□ -1.58
O00370 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
O00370 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
O00370 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
O00370 SNORA74A-201ENST00000364089 198 ntBASIC5.15□□□□□ -1.59
O00370 RNU6-670P-201ENST00000364312 104 ntBASIC5.15□□□□□ -1.59
O00370 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.15□□□□□ -1.59
O00370 RNF19BPX-201ENST00000426224 625 ntBASIC5.15□□□□□ -1.59
O00370 NPM1P26-201ENST00000426339 738 ntBASIC5.15□□□□□ -1.59
O00370 RPL23AP4-201ENST00000427757 463 ntBASIC5.15□□□□□ -1.59
O00370 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.15□□□□□ -1.59
O00370 MTND2P2-201ENST00000434633 945 ntBASIC5.15□□□□□ -1.59
O00370 AC092447.2-201ENST00000435487 669 ntBASIC5.15□□□□□ -1.59
O00370 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.15□□□□□ -1.59
O00370 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.15□□□□□ -1.59
O00370 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.15□□□□□ -1.59
O00370 AL035551.1-201ENST00000446931 348 ntBASIC5.15□□□□□ -1.59
O00370 RPL31P44-201ENST00000447680 377 ntBASIC5.15□□□□□ -1.59
O00370 AC017099.1-201ENST00000448261 1028 ntBASIC5.15□□□□□ -1.59
O00370 AL500527.1-201ENST00000448532 255 ntBASIC5.15□□□□□ -1.59
O00370 OR52J1P-201ENST00000450596 932 ntBASIC5.15□□□□□ -1.59
O00370 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.15□□□□□ -1.59
O00370 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.15□□□□□ -1.59
O00370 RN7SL558P-201ENST00000497468 299 ntBASIC5.15□□□□□ -1.59
O00370 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.15□□□□□ -1.59
O00370 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
O00370 HMGB1P19-201ENST00000517578 577 ntBASIC5.15□□□□□ -1.59
O00370 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.15□□□□□ -1.59
O00370 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.15□□□□□ -1.59
O00370 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.15□□□□□ -1.59
O00370 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.15□□□□□ -1.59
O00370 AL731537.2-201ENST00000561565 951 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms