Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC069240.1-201ENST00000548774 375 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 AC091042.1-201ENST00000579213 173 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.34□□□□□ -1.71
UPK1AO00322 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.34□□□□□ -1.71
UPK1AO00322 AC098935.2-201ENST00000604222 466 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 AC135352.1-201ENST00000506173 1418 ntBASIC4.34□□□□□ -1.71
UPK1AO00322 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPK1AO00322 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
UPK1AO00322 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
UPK1AO00322 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
UPK1AO00322 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.33□□□□□ -1.72
UPK1AO00322 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC093909.5-201ENST00000621839 1799 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 RNA5SP52-201ENST00000362448 134 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 MIR550A3-201ENST00000390735 95 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 RN7SKP216-201ENST00000411050 312 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 AC006455.6-201ENST00000426192 893 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
UPK1AO00322 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.33□□□□□ -1.72
UPK1AO00322 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC011005.3-201ENST00000491624 395 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 AC098799.3-201ENST00000506095 438 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1AO00322 OR7H2P-201ENST00000513483 306 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 AC008694.2-201ENST00000517591 306 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.33□□□□□ -1.72
UPK1AO00322 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.33□□□□□ -1.72
UPK1AO00322 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
UPK1AO00322 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC010547.7-201ENST00000570323 333 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 AL121834.1-201ENST00000572284 509 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC008759.1-201ENST00000589783 983 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 HMGB2P1-201ENST00000591146 634 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 AC073091.2-201ENST00000603205 907 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 AP002360.3-201ENST00000607673 710 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 AC015813.4-201ENST00000610469 179 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC005332.5-201ENST00000591222 2919 ntBASIC4.33□□□□□ -1.72
UPK1AO00322 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
UPK1AO00322 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1AO00322 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
UPK1AO00322 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.33□□□□□ -1.72
UPK1AO00322 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.33□□□□□ -1.72
UPK1AO00322 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1AO00322 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1AO00322 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
UPK1AO00322 AC011503.2-201ENST00000594230 1500 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 MAPK10-263ENST00000641052 4307 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 AC010928.1-201ENST00000592477 1447 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1AO00322 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1AO00322 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1AO00322 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1AO00322 AL590240.1-201ENST00000334118 313 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 RN7SKP115-201ENST00000363177 317 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 RNA5SP87-201ENST00000384155 118 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 AC007068.1-201ENST00000396690 844 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 VN1R8P-201ENST00000407739 893 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 RN7SKP247-201ENST00000411094 308 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 ATG4AP1-201ENST00000416893 538 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 DYNLL1P7-201ENST00000429273 258 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1AO00322 RPL7P33-201ENST00000444159 742 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 RPS27AP15-201ENST00000447672 466 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1AO00322 AL645937.3-201ENST00000453647 936 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1AO00322 AC012158.1-204ENST00000483430 465 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.32□□□□□ -1.72
UPK1AO00322 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.32□□□□□ -1.72
UPK1AO00322 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1AO00322 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.32□□□□□ -1.72
UPK1AO00322 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.32□□□□□ -1.72
UPK1AO00322 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1AO00322 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1AO00322 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1AO00322 RPL26P30-202ENST00000602923 645 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 AC010201.1-201ENST00000605051 540 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 FAM25E-202ENST00000608562 189 ntBASIC4.32□□□□□ -1.72
UPK1AO00322 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1AO00322 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1AO00322 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms