Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 OR52B1P-201ENST00000316506 909 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AP002530.1-201ENST00000405705 684 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AMZ2P2-201ENST00000406819 1057 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 OR5M12P-201ENST00000423388 929 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 COX6CP13-201ENST00000428703 226 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 MRPS33P4-201ENST00000434892 317 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 FHP1-201ENST00000442741 703 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 RN7SL809P-201ENST00000482040 297 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AC021146.7-201ENST00000509604 775 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 ACTR6P1-201ENST00000514311 1104 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AC100784.1-201ENST00000522790 310 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 MAPK10-286ENST00000641208 8747 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 AL034370.1-201ENST00000397254 1590 ntBASIC4.57□□□□□ -1.68
NPIPA2E9PIF3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 ZNF652P1-201ENST00000442420 1309 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 SNORA2.3-201ENST00000383920 135 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AL606490.7-201ENST00000433136 191 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 CYCSP24-201ENST00000445119 316 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 MYL12BP2-201ENST00000503948 512 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 ENPP7P11-201ENST00000505915 627 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC113430.1-201ENST00000506872 718 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 RNA5SP43-201ENST00000516559 110 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC026616.1-201ENST00000523157 525 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 HIGD1AP5-201ENST00000529959 259 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC009117.1-201ENST00000563948 554 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC127024.5-201ENST00000580085 462 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 MIR6798-201ENST00000612887 67 ntBASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
NPIPA2E9PIF3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms