Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 ADAM5-202ENST00000399789 1942 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 MTND4P9-201ENST00000507819 1346 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC073136.1-201ENST00000449426 2884 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 COX6B1P1-201ENST00000415962 213 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 MTCO1P45-201ENST00000431457 267 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 RPL7P11-201ENST00000437586 658 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC002553.2-201ENST00000453217 340 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 RPL35AP28-201ENST00000459730 331 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AP000942.1-201ENST00000463969 747 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 RFPL4AP5-201ENST00000514977 504 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 RNU6-1102P-201ENST00000516149 96 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 MIR3934-201ENST00000579806 107 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 MIR4760-201ENST00000585040 80 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 BNIP3P40-201ENST00000596017 556 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 MIMT1-201ENST00000597105 1050 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC135178.6-201ENST00000605314 398 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC026979.4-201ENST00000606555 645 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC016957.2-201ENST00000616998 848 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AC087385.3-201ENST00000620477 187 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 AP001642.1-201ENST00000624727 2117 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 ECM1P2-201ENST00000503354 1577 ntBASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNX9Q9Y5X1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AL022322.2-201ENST00000624072 20397 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AL035405.1-201ENST00000400795 710 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC016769.2-201ENST00000414815 475 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 MORF4L1P7-201ENST00000426038 703 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC104837.2-201ENST00000427236 424 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 RPL31P44-201ENST00000447680 377 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 RPS3AP41-201ENST00000462701 778 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 RPL7P16-201ENST00000479738 738 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC231760.1-201ENST00000498002 260 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC093890.1-201ENST00000502554 540 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 MYL12BP2-201ENST00000503948 512 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 PCNAP1-201ENST00000505363 709 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 RNU6-889P-201ENST00000517189 103 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC021006.3-201ENST00000530771 192 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 GCSHP4-201ENST00000538792 439 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC015911.5-201ENST00000587076 451 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 KATNBL1P5-201ENST00000605015 517 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AL135786.2-201ENST00000608422 615 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC018645.2-201ENST00000609151 472 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 Mico1.1-201ENST00000611698 204 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC104763.3-201ENST00000613765 618 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC009269.6-201ENST00000621778 588 ntBASIC5.32□□□□□ -1.56
SNX9Q9Y5X1 AC019206.1-201ENST00000621938 425 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms