Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 snoU109.6-201ENST00000516831 118 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 RNA5SP392-201ENST00000516905 112 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 OR10D4P-201ENST00000525892 951 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 OR5AZ1P-201ENST00000527448 943 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 BNIP3P32-201ENST00000600015 554 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AL021368.1-201ENST00000607490 540 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC074276.2-201ENST00000619891 348 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC019206.1-201ENST00000621938 425 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC091905.4-201ENST00000623432 202 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AL353662.3-201ENST00000625131 237 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC021242.1-201ENST00000507315 2035 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC017002.4-201ENST00000604721 1525 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 AC107027.3-201ENST00000565095 3473 ntBASIC4.66□□□□□ -1.66
ATG4BQ9Y4P1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 AC092079.1-201ENST00000558620 1985 ntBASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 AL445437.1-201ENST00000623157 3087 ntBASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 INTS6P1-201ENST00000504674 2530 ntBASIC4.65□□□□□ -1.66
ATG4BQ9Y4P1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AL589826.1-201ENST00000340697 249 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 RN7SKP95-201ENST00000362860 303 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 RNA5SP123-201ENST00000363244 119 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 MIR937-201ENST00000401271 86 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AL133270.1-201ENST00000402635 279 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AP002530.1-201ENST00000405705 684 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 OR5M12P-201ENST00000423388 929 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 MTND2P2-201ENST00000434633 945 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 RPL7P11-201ENST00000437586 658 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 BTBD7P2-201ENST00000441962 620 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 TRY2P-201ENST00000448860 689 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AP002345.1-201ENST00000456493 928 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 snoU13.20-201ENST00000459180 104 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 RN7SL517P-201ENST00000462240 305 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC021087.2-201ENST00000504656 1203 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC093770.1-201ENST00000511559 571 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 RFPL4AP5-201ENST00000514977 504 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AP006245.2-201ENST00000522004 300 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AP001922.4-201ENST00000526967 290 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 OR5D15P-201ENST00000531671 942 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AL049830.4-201ENST00000555149 351 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 MIR4436B2-201ENST00000581415 91 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 MIR4436B1-201ENST00000583272 91 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AL133247.2-201ENST00000603236 482 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC015802.5-201ENST00000607478 399 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC004948.1-201ENST00000609858 672 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC104307.1-201ENST00000616142 196 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC003001.2-201ENST00000616294 831 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 TMEM30CP-203ENST00000637814 1035 ntBASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ATG4BQ9Y4P1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms