Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 SOCS5P3-201ENST00000425115 1576 ntBASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 CYCSP34-201ENST00000458172 304 ntBASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 RNA5SP116-201ENST00000516132 98 ntBASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 AP001804.2-201ENST00000533932 910 ntBASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 MIR5699-201ENST00000578903 90 ntBASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 TTC41P-205ENST00000551270 3963 ntBASIC9.06□□□□□ -0.96
SHROOM4Q9ULL8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC245100.2-201ENST00000454544 1679 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 YWHAZP2-201ENST00000440317 728 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 ENPP7P11-201ENST00000505915 627 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 SAP18P1-201ENST00000512058 390 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC053481.3-201ENST00000577881 843 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC006133.1-201ENST00000617106 264 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AL445567.2-201ENST00000618935 498 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AL035461.2-201ENST00000619201 524 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC104820.1-201ENST00000624183 307 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC067931.1-201ENST00000624190 671 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 CYP1D1P-201ENST00000416662 1433 ntBASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC9.05□□□□□ -0.96
SHROOM4Q9ULL8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AC140134.1-201ENST00000511830 3544 ntBASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 MGP-201ENST00000228938 694 ntTSL 3 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AL607077.1-201ENST00000401718 499 ntBASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 RPL31P20-201ENST00000449593 360 ntBASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AC239798.3-201ENST00000454459 408 ntBASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AC090948.1-201ENST00000607464 549 ntBASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 RAD17P1-201ENST00000418130 2042 ntBASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC9.04□□□□□ -0.96
SHROOM4Q9ULL8 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 SNX18P3-202ENST00000565670 1750 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 MTND3P20-201ENST00000407663 186 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 ACTR3P2-201ENST00000439585 1257 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 RNA5SP143-201ENST00000516936 115 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 SEC11B-201ENST00000518383 499 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 AC040958.1-201ENST00000561102 201 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 MIR4433B-201ENST00000581329 102 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 AC025574.1-201ENST00000554784 1653 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 AC087565.3-202ENST00000642085 1603 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 TLK1P1-201ENST00000456760 2440 ntBASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SHROOM4Q9ULL8 RNU6-618P-201ENST00000363518 112 ntBASIC9.02□□□□□ -0.96
SHROOM4Q9ULL8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC9.02□□□□□ -0.96
SHROOM4Q9ULL8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC9.02□□□□□ -0.96
SHROOM4Q9ULL8 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC9.02□□□□□ -0.96
SHROOM4Q9ULL8 AC009237.10-201ENST00000414112 510 ntBASIC9.02□□□□□ -0.96
SHROOM4Q9ULL8 AC009237.5-201ENST00000414271 501 ntBASIC9.02□□□□□ -0.96
SHROOM4Q9ULL8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC9.02□□□□□ -0.96
SHROOM4Q9ULL8 OR9N1P-201ENST00000491296 333 ntBASIC9.02□□□□□ -0.96
SHROOM4Q9ULL8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC9.02□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms