Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-839P-201ENST00000363347 108 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CNTN3Q9P232 RNU6-116P-201ENST00000384042 109 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 AIMP1P1-201ENST00000418670 937 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 TIMM9P3-201ENST00000428659 274 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 SKP1P3-201ENST00000429280 487 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 RPSAP65-201ENST00000429660 595 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC108479.1-201ENST00000431142 427 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 RPL21P110-201ENST00000433345 446 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 AL831737.1-201ENST00000441288 271 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC013267.1-201ENST00000458227 267 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 SNX5P1-201ENST00000505757 1041 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 STMN1P2-201ENST00000508435 439 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 HSD3BP3-201ENST00000514706 994 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC026826.3-201ENST00000561747 158 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC097467.4-201ENST00000605504 141 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 RNU6-88P-201ENST00000606801 100 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AL354760.1-201ENST00000608357 643 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC092681.3-201ENST00000609463 678 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC126177.8-201ENST00000618339 1015 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC092650.2-201ENST00000619984 902 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 AC073593.1-201ENST00000624500 411 ntBASIC6.9□□□□□ -1.3
CNTN3Q9P232 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
CNTN3Q9P232 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNTN3Q9P232 AC131971.1-201ENST00000332881 1482 ntBASIC6.9□□□□□ -1.31
CNTN3Q9P232 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNTN3Q9P232 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNTN3Q9P232 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CNTN3Q9P232 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
CNTN3Q9P232 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
CNTN3Q9P232 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CNTN3Q9P232 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CNTN3Q9P232 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.9□□□□□ -1.31
CNTN3Q9P232 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.9□□□□□ -1.31
CNTN3Q9P232 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.9□□□□□ -1.31
CNTN3Q9P232 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
CNTN3Q9P232 WBP11P1-201ENST00000562560 1931 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 IMMTP1-201ENST00000435590 2219 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 RNU6-1066P-201ENST00000363573 105 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 RNU6-619P-201ENST00000365146 108 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 RNU6-98P-201ENST00000384173 107 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 SNORA40.3-201ENST00000390964 122 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 OR51A3P-201ENST00000413596 924 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNTN3Q9P232 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC007742.1-201ENST00000425789 329 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 ELOCP26-201ENST00000436067 329 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC104306.1-201ENST00000449702 371 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 RN7SL170P-201ENST00000487098 295 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 OR4D12P-201ENST00000509361 911 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 RN7SKP70-201ENST00000516655 271 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AP001189.2-201ENST00000527320 189 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC036111.2-201ENST00000533247 901 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 RAB11AP2-201ENST00000545905 639 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 OR6C73P-201ENST00000546432 358 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 POLR2KP1-201ENST00000553226 168 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 ANP32BP3-201ENST00000559213 706 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 AL117336.2-201ENST00000602435 335 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 CYP1D1P-201ENST00000416662 1433 ntBASIC6.89□□□□□ -1.31
CNTN3Q9P232 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNTN3Q9P232 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNTN3Q9P232 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CNTN3Q9P232 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CNTN3Q9P232 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CNTN3Q9P232 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms