Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU1-20P-201ENST00000363314 162 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 RN7SKP97-201ENST00000410966 333 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 RPL36AP10-201ENST00000421785 322 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 RPS3AP54-201ENST00000435535 734 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 ELOCP3-201ENST00000439303 348 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 RPS29P33-201ENST00000456717 146 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC138938.1-201ENST00000515431 782 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 RNA5SP446-201ENST00000515955 82 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 RN7SL435P-201ENST00000584418 282 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AP003497.2-201ENST00000624220 967 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC104260.2-201ENST00000623551 3497 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 EI24P3-201ENST00000399046 1062 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC092017.2-201ENST00000427600 362 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 RPL21P126-201ENST00000470049 478 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 RN7SL481P-201ENST00000477764 299 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC021106.3-201ENST00000623925 531 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 OR2L1P-202ENST00000641567 1023 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 OR52H1-202ENST00000641796 1061 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 AC090017.1-201ENST00000548612 1779 ntBASIC4.39□□□□□ -1.71
CCDC88CQ9P219 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCDC88CQ9P219 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 RNU1-83P-201ENST00000363426 164 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 RNU1-130P-201ENST00000363930 160 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 MIR195-201ENST00000385194 87 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 RNU4-25P-201ENST00000410569 230 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AL356095.1-201ENST00000417217 199 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC092162.1-201ENST00000432828 434 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 Z95152.1-201ENST00000453556 656 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 PPIAP21-201ENST00000464473 501 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AP001002.1-201ENST00000625148 1513 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 Z98755.1-201ENST00000407015 1384 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC008758.3-201ENST00000507003 1829 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AL136164.3-201ENST00000624429 3978 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 NACAP7-201ENST00000407371 609 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 NRBF2P2-201ENST00000413087 861 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 NPM1P33-201ENST00000438918 872 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 RPL23AP93-201ENST00000440847 484 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC109327.1-201ENST00000471666 403 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC068831.4-201ENST00000556118 109 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC069061.3-201ENST00000582254 823 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 MIR3939-201ENST00000582614 106 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC020915.5-201ENST00000596836 964 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AL034374.2-201ENST00000605281 548 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms