Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 SAMMSON-226ENST00000642089 1582 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AL391684.1-202ENST00000641293 1636 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 OR10J6P-201ENST00000289731 930 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 RNU4-4P-201ENST00000364588 130 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 RPL5P19-201ENST00000404228 893 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 CYCSP10-201ENST00000417973 294 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 PDSS1P1-201ENST00000422953 1114 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 PTMAP3-201ENST00000447474 330 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC108463.1-201ENST00000450258 347 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC109462.1-201ENST00000491087 368 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 SCARNA22-201ENST00000503991 125 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC090151.1-201ENST00000520784 730 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC105129.1-201ENST00000560250 297 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 RN7SL176P-201ENST00000580352 264 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC004241.3-201ENST00000611728 517 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC009163.6-201ENST00000612367 342 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 EIF3FP1-201ENST00000613970 806 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AC112694.2-201ENST00000623697 768 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 OR8A1-204ENST00000642111 1145 ntBASIC4.37□□□□□ -1.71
VAPAQ9P0L0 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.37□□□□□ -1.71
VAPAQ9P0L0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC107027.3-201ENST00000565095 3473 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC097523.2-201ENST00000435551 652 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 CYCSP11-201ENST00000436426 315 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AL133244.1-201ENST00000456007 258 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 RPL5P16-201ENST00000471467 790 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC090013.1-201ENST00000485147 480 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC008953.1-201ENST00000497334 318 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 KATNBL1P4-201ENST00000503545 918 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 STMN1P2-201ENST00000508435 439 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 RNA5SP92-201ENST00000516437 110 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 OR10G5P-201ENST00000532733 358 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC011270.1-201ENST00000558606 583 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 MIR4489-201ENST00000578869 62 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 AC093535.2-201ENST00000624769 2326 ntBASIC4.36□□□□□ -1.71
VAPAQ9P0L0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAPAQ9P0L0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AL450326.2-201ENST00000421913 1962 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 RN7SKP115-201ENST00000363177 317 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AL512430.2-201ENST00000406786 339 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 RN7SKP206-201ENST00000410823 293 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC093162.1-201ENST00000419682 124 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms