Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 OR7A19P-201ENST00000608051 733 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 MIR6853-201ENST00000619642 74 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC004232.3-201ENST00000622977 525 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC097372.4-201ENST00000625025 466 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AL391684.1-202ENST00000641293 1636 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AL136164.3-201ENST00000624429 3978 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 CCNB2P1-201ENST00000399411 1150 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AMZ2P2-201ENST00000406819 1057 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 BX510359.2-201ENST00000417920 305 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 RPL21P91-201ENST00000429231 479 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 HSFY7P-201ENST00000432672 318 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 RPL12P18-201ENST00000437175 325 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 HSFY8P-201ENST00000437934 318 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AL935212.3-201ENST00000450729 284 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 HSFY5P-201ENST00000453726 309 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 ISCUP1-201ENST00000454451 448 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 RPS3AP53-201ENST00000454716 778 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC026348.1-201ENST00000462549 1053 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 RPS3AP41-201ENST00000462701 778 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 RN7SL329P-201ENST00000467740 299 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 OR7H2P-201ENST00000513483 306 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC044860.2-201ENST00000561005 179 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AL512782.1-201ENST00000603093 364 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AL671309.1-201ENST00000603750 544 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC098935.2-201ENST00000604222 466 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 LINC00216-201ENST00000623548 1126 ntBASIC4.98□□□□□ -1.61
SIX2Q9NPC8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX2Q9NPC8 KARSP3-201ENST00000571212 1504 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC097063.1-201ENST00000426714 1797 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AL590240.1-201ENST00000334118 313 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 MIR105-2-201ENST00000385083 81 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 ATG4AP1-201ENST00000416893 538 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 ARAFP1-201ENST00000422172 605 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 PPIAP13-201ENST00000434706 478 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 TXNP2-201ENST00000443918 295 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 SCARNA10-201ENST00000459255 330 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC015908.1-201ENST00000478739 476 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC093270.2-201ENST00000486157 792 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC007016.1-201ENST00000512110 244 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 RNU6-1334P-201ENST00000516032 105 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 OR5M2P-201ENST00000529003 936 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AP000676.2-201ENST00000529711 301 ntBASIC4.97□□□□□ -1.61
SIX2Q9NPC8 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX2Q9NPC8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms